PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01051.1.g00260.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 465aa    MW: 50917.4 Da    PI: 10.2576
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01051.1.g00260.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.36e-22327389163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     +kelkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +L+ke+++lk+ ++kl++e+
  Zmw_sc01051.1.g00260.1.sm.mkhc 327 DKELKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENASLQKEINKLKESSQKLRMEN 389
                                     699*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.5E-21106194IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.9E-18323386No hitNo description
SMARTSM003386.6E-21327391IPR004827Basic-leucine zipper domain
PfamPF001701.9E-20328389IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.484329392IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11330386No hitNo description
CDDcd147029.92E-20332380No hitNo description
PROSITE patternPS000360334349IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MLQGTRHGAD LASDGCTKPN ARRSQIARRA KGTPGIGRRH VPRPHLASKS IALRPPHPSP  60
RPCVEPPHSH LPISVRLPRR NKDSDSDSFL RRSPTDRRSW HSQETMGHDK AVVTQISGKT  120
PFSAKDQPAA FPYLDWSAMQ SYYGPGILPP AFFNPGHVPP PFMWAPQNLP TPAFGKPYAA  180
IYPHAGGFLH PFMPLMVNPL NAEPAKSVNS KDDSLNKKLK ETDGTAVSTG SGNSEKTSGD  240
YSLEGSSDGN NQRACETPKK RTIDDMTTSG AKTCGASIPK DKPREPGELA TLANLRIPDV  300
AVKPCASAGS DFRVGGTPST EWSAKDDKEL KRERRKQSNR ESARRSRLRK QAETEELARK  360
VELLTAENAS LQKEINKLKE SSQKLRMENS AFMEKLKERA PDDDAQDEPP DQTHTATAPP  420
PVRVVKNFLS TMDGAGAPRH MEHDAPRLRQ LLGSSRLPAD MVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1343349RRSRLRK
2343350RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817312.11e-179G-box-binding factor 3-like
TrEMBLD2CP300.0D2CP30_ELECO; G-box binding factor 3
STRINGSi001929m1e-179(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888