PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01017.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

FAR1

Protein Properties

Length: 410aa MW: 45899.2 Da PI: 11.045

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01017.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.7e-07	353	409	1	67
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 ++Yn Y+ e GF +r s+ + rn+ + ++++vC ++g +e+++k+ + r++Ck kl+ Zmw_sc01017.1.g00070.1.am.mkhc 353 NYYNLYSWERGFGIRCGGSEIN-RNQCVLMKELVCMCQGLPETNTKT---------SIRCDCKSKLV 409 69*************99998.7777************998877.........78888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence Send to blast
ARGAPADGRQ LYATLVARQL VDYCTLRAPA DGFNHCTLRT QRGNHPRTSR PQTAIARKLD 60 RSYPRAAPTR GCRHAPDTRT AEASSRPVTS VHTPWRPDAH ALRSPLYKDF LLCRAAAMDG 120 STIRCAIKIR ARAGRRGLHK KKAQPSPPLL PVTLSCFRPL HRILGIAASL GFVEGTSVSD 180 GSSWHQQRRR LWERHYGADV RFYFVPRVHI ARSLADPVAC FIVVVEWLRR SHKGVISGRP 240 ARLRVKEAGI HPGWLMKLML VKCAHYGSAN AFGLVQFGRR FQIPSKRVSN LRAGTHKLRM 300 AIQLGVRGPA ERTPASGRVA PIEEAQLSFK DRPECVIILK VGVTFDSYEE GFNYYNLYSW 360 ERGFGIRCGG SEINRNQCVL MKELVCMCQG LPETNTKTSI RCDCKSKLVL

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence Send to blast

ARGAPADGRQ LYATLVARQL VDYCTLRAPA DGFNHCTLRT QRGNHPRTSR PQTAIARKLD  60
RSYPRAAPTR GCRHAPDTRT AEASSRPVTS VHTPWRPDAH ALRSPLYKDF LLCRAAAMDG  120
STIRCAIKIR ARAGRRGLHK KKAQPSPPLL PVTLSCFRPL HRILGIAASL GFVEGTSVSD  180
GSSWHQQRRR LWERHYGADV RFYFVPRVHI ARSLADPVAC FIVVVEWLRR SHKGVISGRP  240
ARLRVKEAGI HPGWLMKLML VKCAHYGSAN AFGLVQFGRR FQIPSKRVSN LRAGTHKLRM  300
AIQLGVRGPA ERTPASGRVA PIEEAQLSFK DRPECVIILK VGVTFDSYEE GFNYYNLYSW  360
ERGFGIRCGG SEINRNQCVL MKELVCMCQG LPETNTKTSI RCDCKSKLVL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP71550	2	2