PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01010.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 397aa MW: 44367 Da PI: 12.0864

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01010.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.9	1.6e-11	279	323	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ +r +NRe+ArrsR+RK++++eeL +v+ L+aeN + + ++ Zmw_sc01010.1.g00030.1.am.mkhc 279 RKRKRTLSNRESARRSRARKQQRLEELVAEVARLQAENARAQARI 323 577899********************************8766665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.5E-16	275	339	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.22	277	340	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.6E-11	277	332	No hit	No description
SuperFamily	SSF57959	1.29E-9	279	330	No hit	No description
Pfam	PF00170	6.3E-8	279	321	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	282	297	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
MRRRGGPSVD ERRGGPSRTS PESDHRDRAV RHCTRSLASW LFLHTERPTP TRYLRQLRSR 60 KSAGMRPAHA GSIPSDDPLF PAITVYLEFS QSVPKLRRHC SLPGVPTSHL HTSKSGADLL 120 RLDHSRADLL RPAVHRSLAA PIFFVSTVAA PRRPSAKWVW RWRGPGLVRT AVNLAMMLLH 180 LRTSARSASG LLISRIIQAA AAAGPHVHLP VSLTSAHRRP MKLRVLRRRR SHSFSVAFLY 240 WFYKEKIDLA MSSSRRSSSP DSHMDGSTGA VVASPAAERK RKRTLSNRES ARRSRARKQQ 300 RLEELVAEVA RLQAENARAQ ARIAAFDREL GKVDGDNAVL RARHGELAGR LEALTGVLEV 360 FQMAGATVDI PEIPDPMLRP WQPPFQMQPV AADAFQY

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

MRRRGGPSVD ERRGGPSRTS PESDHRDRAV RHCTRSLASW LFLHTERPTP TRYLRQLRSR  60
KSAGMRPAHA GSIPSDDPLF PAITVYLEFS QSVPKLRRHC SLPGVPTSHL HTSKSGADLL  120
RLDHSRADLL RPAVHRSLAA PIFFVSTVAA PRRPSAKWVW RWRGPGLVRT AVNLAMMLLH  180
LRTSARSASG LLISRIIQAA AAAGPHVHLP VSLTSAHRRP MKLRVLRRRR SHSFSVAFLY  240
WFYKEKIDLA MSSSRRSSSP DSHMDGSTGA VVASPAAERK RKRTLSNRES ARRSRARKQQ  300
RLEELVAEVA RLQAENARAQ ARIAAFDREL GKVDGDNAVL RARHGELAGR LEALTGVLEV  360
FQMAGATVDI PEIPDPMLRP WQPPFQMQPV AADAFQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	298	RRSRARKQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1886	35	100