PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00996.1.g00230.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 253aa    MW: 28297.5 Da    PI: 6.2857
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00996.1.g00230.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.6e-161466148
                                  TSSS-HHHHHHHHHHHHHTTTT-HH......HHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWk......tIartmgkgRtlkqcksrwqkyl 48
                                  +g+WT+eEd++l+ +++++G g+W+      +Ia +++ +Rt++++k++w+++l
  Zmw_sc00996.1.g00230.1.sm.mk 14 KGPWTPEEDQKLLAYIEEHGHGSWRalpakaAIATHLP-KRTDNEIKNYWNTHL 66
                                  79********************8862222226888888.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-16876IPR009057Homeodomain-like
PROSITE profilePS5129422.71970IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.5E-241267IPR009057Homeodomain-like
SMARTSM007177.3E-151368IPR001005SANT/Myb domain
PfamPF002493.0E-151466IPR001005SANT/Myb domain
CDDcd001677.88E-151666No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAAIATHL PKRTDNEIKN  60
YWNTHLKKRL TKMGIDPVTH KATNGTLMGT ANDKSAKAAA NLSHMTQWES ARLEAEARPG  120
VTHLRIDVYR VQEWHDANPH NQHARDIGEQ LQESNWQFLS KQQGSVLDRK ERTENPIGCE  180
EPWFTGMSGV GAGFTGMLLD ESIAHDRSEC WGESSNVQTE NSSQGSDEEE KNYWSGILGI  240
VNSDLPIQSS TLL
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002444392.11e-97transcription factor MYB106
SwissprotQ9LE634e-59MY106_ARATH; Transcription factor MYB106
TrEMBLA0A2T7D7R41e-107A0A2T7D7R4_9POAL; Uncharacterized protein
STRINGSb07g021210.14e-97(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56093758