PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00996.1.g00100.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 749aa MW: 80086.9 Da PI: 8.98

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00996.1.g00100.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	30.5	8.3e-10	466	489	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 prlrWt eLH+rFv av++LGG++ Zmw_sc00996.1.g00100.1.am.mk 466 PRLRWTRELHARFVLAVSELGGAD 489 8*********************97 PP
2	G2-like	46.3	9.2e-15	512	550	17	55
G2-like 17 aveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 + LG + +AtPk++l++m v gLtl+hvkS LQkYR+ Zmw_sc00996.1.g00100.1.am.mk 512 TIFFLGVTAEATPKAVLRVMAVRGLTLHHVKSYLQKYRT 550 566699999*****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.16E-9	464	490	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.4E-25	464	490	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.9E-11	512	550	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	6.4E-25	522	553	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.16E-9	523	552	IPR009057	Homeodomain-like
Pfam	PF14379	1.7E-14	603	640	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence Send to blast
MCCWSTWSSA GGGGEPRLAS KTDVRPAAGI DLIQGREGRR ESTVDSAVSD YGVSNSGLLS 60 SPRGARMIGT APATGQTKRT VLSADTSSKG AGRGKAKAHC VRSYYSRGAK RSRATEAGWM 120 IGSVLRFLED DLPTQSTDLI DHEGFPGPSD ARAKQASQGT NASKETNRSQ QLMFARLLTR 180 RRSGDQNVLA RRSGLNTTDD LVVAPATGQQ HSSRPRRSGI GPNTRACAPG VVQKLPLRSM 240 PIAKGQFANC VGARLPPLLV VGGLRVVGRP SPSASLGARG DVVAASGGGA ARIRSKEEEG 300 EECEGTARQQ GRPASVTLPT AERFAPFRGQ RSESKRSNQL RMRKKMHGIL AWPRGPRLPR 360 HPYSLPSSPP GRRVVYMRTY IPQATGSTEE EYIRAVESKE NQPAQCSASD SGSAPPAAAA 420 SHAGGHATDA ATPRDVDFDT LEMSSSGGGG VYAGQSGGEA AAGRSPRLRW TRELHARFVL 480 AVSELGGADS ECSLIGARFP LRLSALVLMI KTIFFLGVTA EATPKAVLRV MAVRGLTLHH 540 VKSYLQKYRT AVSSGLGTVT ADNGEGQNDW SSSSENEYNE EDRAFAGDEG EALCDSSRSV 600 VWMQREVQRN LQDQIEVQRR LQLRIEAQGR YLESLLRRAY DVPADHSLGS PAEAAETEHS 660 EITSPAVSTS SSSLSSSPPR HGSTDSCVTS SSSSEAESKT WRRYTCADAR ECTVNQPVQS 720 KRDVLQGDAE EAEEDADTEN GSSEFDLNR

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence Send to blast

MCCWSTWSSA GGGGEPRLAS KTDVRPAAGI DLIQGREGRR ESTVDSAVSD YGVSNSGLLS  60
SPRGARMIGT APATGQTKRT VLSADTSSKG AGRGKAKAHC VRSYYSRGAK RSRATEAGWM  120
IGSVLRFLED DLPTQSTDLI DHEGFPGPSD ARAKQASQGT NASKETNRSQ QLMFARLLTR  180
RRSGDQNVLA RRSGLNTTDD LVVAPATGQQ HSSRPRRSGI GPNTRACAPG VVQKLPLRSM  240
PIAKGQFANC VGARLPPLLV VGGLRVVGRP SPSASLGARG DVVAASGGGA ARIRSKEEEG  300
EECEGTARQQ GRPASVTLPT AERFAPFRGQ RSESKRSNQL RMRKKMHGIL AWPRGPRLPR  360
HPYSLPSSPP GRRVVYMRTY IPQATGSTEE EYIRAVESKE NQPAQCSASD SGSAPPAAAA  420
SHAGGHATDA ATPRDVDFDT LEMSSSGGGG VYAGQSGGEA AAGRSPRLRW TRELHARFVL  480
AVSELGGADS ECSLIGARFP LRLSALVLMI KTIFFLGVTA EATPKAVLRV MAVRGLTLHH  540
VKSYLQKYRT AVSSGLGTVT ADNGEGQNDW SSSSENEYNE EDRAFAGDEG EALCDSSRSV  600
VWMQREVQRN LQDQIEVQRR LQLRIEAQGR YLESLLRRAY DVPADHSLGS PAEAAETEHS  660
EITSPAVSTS SSSLSSSPPR HGSTDSCVTS SSSSEAESKT WRRYTCADAR ECTVNQPVQS  720
KRDVLQGDAE EAEEDADTEN GSSEFDLNR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11264	30	38