PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00992.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 375aa MW: 41917.3 Da PI: 9.2381 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.6 | 2e-52 | 9 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 +pGfrFhPtdeelv++yLk+k+++k++++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+ Zmw_sc00992.1.g00150.1.am.mk 9 MPGFRFHPTDEELVSFYLKRKIQQKPISI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSLRPNRVTAAGF 88 69***************************.89***************9888999*************************** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++++s+ +++ +glkk+Lvfykgra +g ktdW+mhe+rl Zmw_sc00992.1.g00150.1.am.mk 89 WKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAARGMKTDWMMHEFRL 135 ************956667***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 52.275 | 8 | 160 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-54 | 9 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.0E-26 | 10 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MDKADEIIMP GFRFHPTDEE LVSFYLKRKI QQKPISIELI RQLDIYKYDP WDLPKLASTG 60 EKEWYFYCPR DRKYRNSLRP NRVTAAGFWK ATGTDRPIYS SEGTKCIGLK KSLVFYKGRA 120 ARGMKTDWMM HEFRLPSPTD PSLPKRPIHK NIPLNRGLSH SWGPPFPGAT EAEFFSAFQT 180 VQASELALES SSCSLQPAPP APSSQFTSRH GLQVVFGAQL DHQLHRFVVD SSAEINGDTS 240 SRSQDSSTKK SGNGFSVSNS DWEAVGRINF PFDLGADASE EWRGRLEEIP SAMGRTGLGV 300 DGERTSQIGL IWRSNGLGLV GSSRHLIWAA YAGRSVGDHY RLFLMGRRPV GGNLHLGLTA 360 SWAGYVDGEC REHMG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-48 | 10 | 139 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 10 | 139 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 10 | 139 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 10 | 139 | 19 | 146 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swm_B | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swm_C | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swm_D | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swp_A | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swp_B | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swp_C | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
3swp_D | 7e-48 | 10 | 139 | 22 | 149 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 10 | 139 | 19 | 146 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 10 | 139 | 19 | 146 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022683500.1 | 1e-167 | protein FEZ | ||||
TrEMBL | K3YMN3 | 1e-169 | K3YMN3_SETIT; Uncharacterized protein | ||||
STRING | Si015514m | 1e-170 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3366 | 38 | 82 |