PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00992.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 783aa    MW: 84976.9 Da    PI: 8.5466
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00992.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.28.7e-29522575255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   +r+rWt eLH+rFv av++LGG++kAtPk++l++m+v gLtl+h+kS LQkYR+
  Zmw_sc00992.1.g00050.1.am.mk 522 QRVRWTRELHRRFVLAVSELGGADKATPKAVLRVMDVRGLTLHHLKSYLQKYRM 575
                                   7****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.23E-14520578IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.7E-28521579IPR009057Homeodomain-like
TIGRFAMsTIGR015573.5E-21522575IPR006447Myb domain, plants
PfamPF002491.4E-5523574IPR001005SANT/Myb domain
PfamPF143799.4E-14637674IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 783 aa     Download sequence    Send to blast
MMLLPCRGRG REGPGPSSHG SPLPDRRIGI PHVGARTTPA PRLPAFPDSL GPARTHTHAR  60
FPSFENLLFA TALSLVALAL EYGKARNKTR GKEAGNVAEP SPALSLSQAL PAFHAESEAA  120
TIADGGGKKK GKRALAYTAA QAQGSDEHAK DADTTVSVRP SPREKRIVVT DRRSVGQVDE  180
WNGTVCVKRI EREAETRRYR DENDAGSCAC CDPGIGTSLD GHLASEAWPG IVVGDHTSSA  240
GPNTRACAPG VGQKLPLRSM PIATSGDGEG GSLASRAASD EWRSGLDSLI RLSPQKPGAV  300
CQLRQGAAAA GAGRPLRSPS LGVRGKRCGG ETLRLGTEGI RSKEEEGDEF ELYRFRTAER  360
FSPFQVKGVK AKGGNNGGCK RRCMAYWHGP QLPRHRYSLP FPPCRAYPYI YQRRRSRTHS  420
TEEEYICAVE SKETNLLRAQ PVSNSQLAAY KTAPRHHRLP GTCSCCCRWS SLQLRPSRRA  480
SHAGHAADAA TPRDVVLGTL EMSSSGGCYA GQSGGEPAGR PQRVRWTREL HRRFVLAVSE  540
LGGADKATPK AVLRVMDVRG LTLHHLKSYL QKYRMAVSRG LVEVTDDNGE GQNDRSSSSE  600
NQPEEYDEDT VTEMYRTFAN DESEVLCDSS RSLTWIQREV HRNLQEQIEV QRHLQLRIEA  660
QGRYLHSVLR RAEEVLADYS LDLPEAELSE LVSAAASTSS SLSLSPLHYP STASCVTSSS  720
SSEAESKASA KRLCTCADMR ESTVEQSVQS KRGVLQSHRQ QQGDADEAEA DAENGSSGID  780
LNR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16523579460Protein PHOSPHATE STARVATION RESPONSE 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112643038