PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00963.1.g00270.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 559aa MW: 59295 Da PI: 10.8662

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00963.1.g00270.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7.3e-39	330	389	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +a+kcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+ss Zmw_sc00963.1.g00270.1.am.mk 330 PEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKAKRSS 389 5789****************************************************9976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	321	382	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.5E-33	332	387	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.329	333	387	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	335	371	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence Send to blast
MRSSGTNAEC GACTVLYPRA LYYVVKNGRP ARDPPTGRPV ARLFACADGQ GLSVGHGRVR 60 RAKAIAPALI RAMRRAGGRA CTCAAGWTRV VRSSAVPTSA RVGFTRSIRQ RCHYYARQDV 120 ELGVSTYRAT AVYACASPPA SATCRARATT SPTAGCRNRP AGLPGGVVVV IVIGRCTADV 180 VAARGRHTIA AGSDRSTALA RLAYGDRQPA SVRKWRSRSG WFYESISNES RSRRREREDK 240 PTEIFTGWLV CDPEATPSGW SSRLAVLPPT KRYLARRRGL RLLPRAMQEF QSMPGLAGRL 300 FGGAGASDLR RAHQAQQGPG ARCGGVSPAP EAVKCPRCES TNTKFCYYNN YNLSQPRHFC 360 KSCRRYWTKG GVLRNVPVGG GCRKAKRSSA SAASSTPSTP TSTESKNPRR APAPSPRRTS 420 SGRSSPTGLA AAAAPVTPSS SNNIAVTGHS SANPFSTVDV APPAPIFADQ AAALASLFTP 480 PPPPQLPVFS FTAQSNKDEA ALVAGQAARP DDEAASDMAP FTSLDAGIFE QLGDASAAAA 540 YWNAGSCWTD VQDPSMYLP

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence Send to blast

MRSSGTNAEC GACTVLYPRA LYYVVKNGRP ARDPPTGRPV ARLFACADGQ GLSVGHGRVR  60
RAKAIAPALI RAMRRAGGRA CTCAAGWTRV VRSSAVPTSA RVGFTRSIRQ RCHYYARQDV  120
ELGVSTYRAT AVYACASPPA SATCRARATT SPTAGCRNRP AGLPGGVVVV IVIGRCTADV  180
VAARGRHTIA AGSDRSTALA RLAYGDRQPA SVRKWRSRSG WFYESISNES RSRRREREDK  240
PTEIFTGWLV CDPEATPSGW SSRLAVLPPT KRYLARRRGL RLLPRAMQEF QSMPGLAGRL  300
FGGAGASDLR RAHQAQQGPG ARCGGVSPAP EAVKCPRCES TNTKFCYYNN YNLSQPRHFC  360
KSCRRYWTKG GVLRNVPVGG GCRKAKRSSA SAASSTPSTP TSTESKNPRR APAPSPRRTS  420
SGRSSPTGLA AAAAPVTPSS SNNIAVTGHS SANPFSTVDV APPAPIFADQ AAALASLFTP  480
PPPPQLPVFS FTAQSNKDEA ALVAGQAARP DDEAASDMAP FTSLDAGIFE QLGDASAAAA  540
YWNAGSCWTD VQDPSMYLP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6496	30	50