PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00956.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 336aa MW: 35414.2 Da PI: 10.5234

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00956.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	86.7	2.1e-27	293	336	4	47
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalr 47 + +cprC s++tkfCyynny++sqPr+fC+aCrryWt GG+lr Zmw_sc00956.1.g00010.1.am.mk 293 QGEQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLR 336 5679***************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	5.3E-24	294	336	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	23.887	295	336	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-19	296	336	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	297	333	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence Send to blast
MPCKGPGRGQ QHARRWNAPS SGVVPDRSRC MATESAAYAG AHSGARRLLL LPAGIGVGAG 60 RSAAGGCCRL LGIGGGRLPA FVRRPDVTGR VKGCRRPSLL PGPMVLASSC RRDEEATGGS 120 RTARRVRLGC GLRPGAHGSD KNTSATAVLA MEWMDPTRTA ILSGVVWRPE DDRQMMEGLA 180 PGLHGKLRLF SGSTSARAHL SRPAKTSTTM AGQVMEAPLH QQAPVSLAQL QANDKICDHL 240 GTPAAATMSA SVSCGAATTT TTAAEMAYLR QLQLQQAADA NNSNNGNGGG GSQGEQCPRC 300 ASHDTKFCYY NNYNTSQPRH FCRACRRYWT LGGSLR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP63439	2	2