PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00946.1.g00250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 361aa    MW: 38536.2 Da    PI: 8.5987
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00946.1.g00250.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65e-32235290156
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                     k r++W+peLH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Zmw_sc00946.1.g00250.1.am.mkhc 235 KSRRCWSPELHRQFVAALNQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 290
                                     68****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.764232292IPR017930Myb domain
SuperFamilySSF466895.38E-17233293IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-29233293IPR009057Homeodomain-like
TIGRFAMsTIGR015578.9E-26235290IPR006447Myb domain, plants
PfamPF002493.8E-7237288IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MGLDVGEIGM GADLSLDLRH FAARAMRQSK NAPPASDMDA YIRRLEEERG KIEVFRRELP  60
ICARLLADVI DVMKEEAEKK KRNDRKEDEA GDKSKWMSTA QLWTGGSGSD AAETEKQDKG  120
TSSSSSEPKS CGGAFTPFKA VGSGAPAFGR PCLRNDDKAA GVGTPPDLSP LSPPAVKSVP  180
AGAADKSNCQ VLGFAQAAAR AAAMVPSGPA LSGLQRQPQQ TTPPPQQQQQ QQARKSRRCW  240
SPELHRQFVA ALNQLGGPQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH NRRTPAGSTV  300
VSQPIVLVGG LWIPQEQSSS QSGSPQGPLH FSTSAGVAVS STAATASCEE EDGRSESDGW  360
K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-14235288154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-14235288154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-14235288154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-14235288154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459272.21e-156transcription factor HHO2
TrEMBLA0A0C4MLG70.0A0A0C4MLG7_9POAL; Uncharacterized protein
STRINGSb02g001600.11e-156(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107