PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00941.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GATA

Protein Properties

Length: 213aa MW: 22716 Da PI: 9.7941

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00941.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53	4.8e-17	98	129	1	32
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 Cs C t +Tp+WR+gpdg+ tLCnaCGl+y + Zmw_sc00941.1.g00020.1.am.mk 98 CSRCTTMETPQWREGPDGPGTLCNACGLHYNL 129 *****************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57716	9.03E-14	90	133	No hit	No description
SMART	SM00401	1.5E-11	92	146	IPR000679	Zinc finger, GATA-type
PROSITE profile	PS50114	13.086	92	130	IPR000679	Zinc finger, GATA-type
Gene3D	G3DSA:3.30.50.10	2.4E-14	96	134	IPR013088	Zinc finger, NHR/GATA-type
CDD	cd00202	1.96E-13	97	127	No hit	No description
Pfam	PF00320	1.8E-14	98	128	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence Send to blast
MKGLEDGSLD DPRKGDGEQK GALSAEPASG GALEVSKEDN DVGGLARALR GAAAPAAPPT 60 APGSHETPPA DPSSLEAGGS GTHPMERRRR NRQRNRTCSR CTTMETPQWR EGPDGPGTLC 120 NACGLHYNLD LKRPERRRYG RRRPGPRAQQ PRSRRQRQAS RGAAAEEQAA QQDVQPLRHP 180 ENATVARGPD GPATPAASGT NREIMEGKVA ENP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP71391	2	2