PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00912.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 271aa MW: 29943.5 Da PI: 6.3742

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00912.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	59	101	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr+++NReAAr+sR+RKka++++Le +L + ++L+ Zmw_sc00912.1.g00110.1.sm.mkhc 59 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 101 5899*************************96666666555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-8	56	119	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.9E-8	56	103	No hit	No description
PROSITE profile	PS50217	9.289	58	102	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-7	60	101	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.56E-7	60	103	No hit	No description
PROSITE pattern	PS00036	0	63	78	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.7E-33	142	217	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MADANSRTDT SIVLDTDDKD QRDANVRLGS LKLENGHSGA AMASNSSDRS DRSDKPMDQK 60 VLRRLAQNRE AARKSRLRKK AYVQQLESSK LKLASLEQEL QKARQQGIFI SSSGDQTHSM 120 SGNGAMTFDL EYARWQEEQN KQINELRAAV NAHASDSDLR LIVDGIMAHY DEIFRQKGVA 180 AKADVFHILS GMWKTPAERC FLWLGGFRSS ELLKLLVNQL EPLTEQQMAG LSNLQQSSQQ 240 AEDALSQGME ALQQSLAETL AGSLGTSGLT T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003558037.1	1e-163	transcription factor TGA2.2 isoform X1
Swissprot	Q6IVC3	1e-154	TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBL	I1H628	1e-162	I1H628_BRADI; Uncharacterized protein
STRING	BRADI1G64060.1	1e-163	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP486	38	185

Publications ? help Back to Top
Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20 [PMID:15986920] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]