PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00910.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | HB-other | ||||||||
Protein Properties | Length: 241aa MW: 26694.9 Da PI: 10.1161 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 15.7 | 2.6e-05 | 176 | 208 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 yp++e++ +LA+ +gL+++q+ + F N+R ++ Zmw_sc00910.1.g00010.1.am.mk 176 AYPTEEDKVRLASITGLDTKQINNRFINQRKRH 208 6*****************************885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 10.042 | 148 | 211 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.4E-8 | 150 | 215 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 3.55E-16 | 150 | 219 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.1E-23 | 153 | 213 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 6.10E-8 | 160 | 212 | No hit | No description |
Pfam | PF05920 | 5.6E-13 | 168 | 207 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
GTGRRFQPVH HAGHKDQTEY LDSSRNEYLE EDGEPREGRG AGLADGSGEA AGGEVRRRAD 60 VALLLAPVHG GGVPAAAATA TTVDDDAHAG LRMHRSLARA RVCFVNAPGG LRPRRDEAEA 120 ARQGEQFVEP STAALFFSSE FLKKRKMERK KRKKGKLPKD ARLVLLDWWN THYRWAYPTE 180 EDKVRLASIT GLDTKQINNR FINQRKRHWK PSEDMRFALM EGVAGSSSGT TLYFDAGTIG 240 P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 153 | KKRKK |