PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00909.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 252aa MW: 26601.6 Da PI: 6.5059 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 53.4 | 5.5e-17 | 87 | 119 | 23 | 55 |
G2-like 23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 G++ AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Zmw_sc00909.1.g00020.1.sm.mk 87 GHQGATPKSVLELMDVKDLTLAHVKSHLQMYRT 119 9999****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.2E-6 | 87 | 120 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.5E-15 | 87 | 120 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.1E-11 | 89 | 119 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MEFFPSQPDL SLQIGLPTSA PPHDHHHHHH AAAALNARFF AAGGGAGNGG LVGSAGTMAP 60 SSLQLPGAMP MPLPLPLPVP MHPGAAGHQG ATPKSVLELM DVKDLTLAHV KSHLQMYRTV 120 KNTERPAASS DQADGFEKGA AGEICDDNSL DLQGAYSGGG GRPETAARHG SYSSLSFVSF 180 DVIRREDWTG FPSESSTGSI HSLKDRQMQS KSLEILSDMN SSCVSETTTS STSVDLNLDF 240 TLGRPHQTRR PN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821359.1 | 2e-70 | probable transcription factor RL9 isoform X1 | ||||
TrEMBL | A0A3L6PS85 | 1e-69 | A0A3L6PS85_PANMI; Putative transcription factor RL9 isoform X1 | ||||
STRING | OB08G13890.1 | 1e-67 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4721 | 36 | 65 |