PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00882.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 146aa MW: 15942.3 Da PI: 9.1412 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 42.6 | 1.3e-13 | 120 | 145 | 26 | 51 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQ 51 kAtPk+i ++mkvkgLt++hvkSHLQ Zmw_sc00882.1.g00150.1.sm.mkhc 120 KATPKAIQRVMKVKGLTIYHVKSHLQ 145 8************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF11107 | 6.3E-14 | 11 | 103 | No hit | No description |
TIGRFAMs | TIGR01557 | 1.3E-9 | 119 | 146 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 1.3E-11 | 119 | 145 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MGWAHATVAL EELLGLVRGF VDILVLAGGR TSSGAAATWS CGEVKNALRW ALFFEEVFKN 60 LRDSGQYEDS ASELDAALVE LTSSQDFPKG LAGMRSDTLS SARDIDARKF NTSKLFLLPK 120 ATPKAIQRVM KVKGLTIYHV KSHLQV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954345.1 | 7e-54 | uncharacterized protein LOC101763564 isoform X3 | ||||
TrEMBL | A0A1E5V019 | 3e-54 | A0A1E5V019_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ab03274.1.p | 4e-53 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5494 | 25 | 26 |