PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00868.1.g00250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 284aa MW: 29584.7 Da PI: 9.1172 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.9 | 1.1e-12 | 112 | 155 | 9 | 55 |
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++grW++eIr p++ r++ ++g+f t+eeAa a++aa +++g Zmw_sc00868.1.g00250.1.am.mk 112 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 155 678**********965...4*********************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.372 | 104 | 167 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.21E-19 | 110 | 169 | No hit | No description |
Pfam | PF00847 | 3.3E-7 | 112 | 155 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.1E-19 | 112 | 168 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.9E-18 | 112 | 173 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.15E-13 | 112 | 167 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence Send to blast |
MRRLAPPPQY HALSSHLSAS GEIFATASPS TTPPLLPSLS SFDLLVVRGS CLVPFLLVAS 60 VVSMAGAAAS RATGVAGMGN GRSTAPQGNN NGALSGAGGG GGPKNLGWLG ARRRQGRWAS 120 EIRMPRTRAK LWIGTFATPE EAALAYDAAV FCFYGARVPD SRRLNFPTAP RPNISENMRV 180 RLTVSNIKAI AEHYARTLAV YLVPPPPPVL LPVPAPAPAV PAPMMVNEAP VEATAASAAG 240 AASATTNHGN VNAMDVDSAA ATVEDYFLNF NPGEFDFDHL MADI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002444750.1 | 4e-37 | ethylene-responsive transcription factor ERF015 | ||||
TrEMBL | C5YIM2 | 9e-36 | C5YIM2_SORBI; Uncharacterized protein | ||||
STRING | Sb07g027250.1 | 1e-36 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |