PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00822.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 709aa    MW: 78161.6 Da    PI: 8.3435
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00822.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.95.4e-20545606258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S...SSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa...edpkvveitYegeHnh 58 
                                   +Dg+ WrKYGqKe++g ++pr Y+rC+ +  gC+++++v+r++   e+p + ei Y g H++
  Zmw_sc00822.1.g00050.1.am.mk 545 EDGFIWRKYGQKEINGRKHPRLYFRCANRhqGCTATRRVQRTHvddEEPPAYEIAYYGAHTC 606
                                   7*************************98777**********8722255779*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.777539589IPR003657WRKY domain
SuperFamilySSF1182901.19E-19539607IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-21539607IPR003657WRKY domain
SMARTSM007741.7E-27544608IPR003657WRKY domain
PfamPF031066.0E-22545606IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    Send to blast
MSFSLPEQSG PALPLTDGTL GPCRRRHSPP SPPQSGCCQS PRRITAGAQG RRRRGFFPSE  60
ELPRLELDGS CFLSGTRSLP LLLGRFCGGF GWFRCRQRRD ARWRAGQPRV GVSDDAVSSG  120
WAGAVHVRCR SLMRLDPTHL RPDLVASSQP FIVWWQQAVV CFQEVAAASS ASQVPWRAVI  180
VKPHEWRPPV YGGARQMDLG GDRRSWAQQV QRSFRWPRQP VVLPLSGLRR RVAIGCRCLV  240
LVCAFYRCYG TGCEQDAALK SQVEPSVFFS DGDIYVWQRA RPWTVDELIH RSEFSPDNPA  300
LDVTETVTVV SALAQAISLP GSATCPNRNQ SSAPFIYGIF TNRTLVTPPF PLEKSRHLHV  360
TDDPVNPMEE NETGKSSAAP GARGHLPFLL RPPRVIIHRH SMASLSLSES LMIKGPEESH  420
YQVSHADEVL QLQPRSRVMA LATPDAVVLE LMTMGQQSAA HLGYLLRSAS PASPHQDLVA  480
EILRCCERVI SRLKANGGAS GCCNKRKAVE HNGSAAAWSP PSTPPRKRAR VGAEALGVVT  540
SRTTEDGFIW RKYGQKEING RKHPRLYFRC ANRHQGCTAT RRVQRTHVDD EEPPAYEIAY  600
YGAHTCGGTA ACQPQLPPTV VDFGFSAWGC WTAPAASEQP WLSCDSETSK AGFDEAQTTT  660
MHEWHHAAAL VEVPSATTPC YASDPVTEFL DGCFDWESVI NDVPFDFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-16539606368OsWRKY45
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147