PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00822.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 445aa    MW: 48745.5 Da    PI: 7.3545
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00822.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY27.94.6e-09110131223
                                   --SS-EEEEEEE--TT-SS-EE CS
                          WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                                   +Dgy WrKYGqK +++++fprs
  Zmw_sc00822.1.g00030.1.am.mk 110 SDGYLWRKYGQKRITNTDFPRS 131
                                   7********************8 PP
2WRKY25.52.7e-081622052059
                                   S-EEEEEE-ST...T---EEEEEE-SSS.TTEEEEEEES--SS- CS
                          WRKY  20 fprsYYrCtsa...gCpvkkkversaed.pkvveitYegeHnhe 59 
                                     rsY+rC+++   gCp+ k+v+r ++d p   +++Y  eH+++
  Zmw_sc00822.1.g00030.1.am.mk 162 ACRSYFRCSHHrerGCPAMKQVQRHSHDePPQYVVVYVHEHTCD 205
                                   57********99999*********87652678999******996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.5E-21100129IPR003657WRKY domain
PROSITE profilePS5081113.345104207IPR003657WRKY domain
SuperFamilySSF1182903.66E-7104131IPR003657WRKY domain
SMARTSM007741.4E-25109206IPR003657WRKY domain
PfamPF031068.8E-6111131IPR003657WRKY domain
SuperFamilySSF1182901.14E-7161205IPR003657WRKY domain
PfamPF031061.4E-9163205IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.5E-21164206IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MQTHSRFAAS SSVSADEHEA LIRELTRGHE LTARLWAEAP RALRGQGQAE DTAAFILQEV  60
SRAFTVCISI MRSPPPSRAP PPPPPTEAAT RRFRDENAPR REIVTDAPYS DGYLWRKYGQ  120
KRITNTDFPR SDKRKSRSRT DRVPGQATEL SLTCFPWRHV RACRSYFRCS HHRERGCPAM  180
KQVQRHSHDE PPQYVVVYVH EHTCDTTVWE PEVTPSPAPA GATTSPLPLL ADYLPGLASQ  240
QRGVAQAEQE RQAMVSTLAV VLGAHSPAGS GSRVAAFERE PQQQQHGASA SVVDPSVVGG  300
GGELPRLDVD AELDVMDYDV TGAMYLGDSY GLPDDDGLDL LSIRVRAVAR AAACWCWKVG  360
DGDVRDARVT PAPSRRRHAR SRPATMPCSL LPAAGVDGDV RGLRVFPACE TLIEEPLKQQ  420
RRHGPSNDSL ADIRTESPAG SSDSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458684.14e-76probable WRKY transcription factor 64
TrEMBLC5XNA29e-75C5XNA2_SORBI; Uncharacterized protein
STRINGSb03g038200.11e-75(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125382837