PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00802.1.g00210.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GATA
Protein Properties Length: 644aa    MW: 69889.2 Da    PI: 9.8805
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00802.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.91.4e-18421455135
                          GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                   Cs+C ttkTp+WR gp+g+ tLCnaCGl+y  kg+
  Zmw_sc00802.1.g00210.1.am.mk 421 CSHCSTTKTPQWRAGPRGPGTLCNACGLRYTDKGS 455
                                   ******************************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.123415454IPR000679Zinc finger, GATA-type
SMARTSM004018.0E-17415470IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.55E-15417477No hitNo description
Gene3DG3DSA:3.30.50.106.2E-15419454IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.98E-18420477No hitNo description
PROSITE patternPS003440421446IPR000679Zinc finger, GATA-type
PfamPF003203.3E-16421455IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 644 aa     Download sequence    Send to blast
MVPQQTDEPR RRLSWKARPA VTPYVFRGDA RAATTTRTPL RRVSQKESRH TSRSHAGPAT  60
HDDFRTLPLQ VAATRMVFLN RGPLLLLRGT RAVVPPANFD DAHDYLDDDD VPVLPLQRKR  120
GHRRYPCQPR GRLARGGLSC PDDELNKVVP VEYFDFDKFP ADNTPDDVLG LDGSALSETS  180
GHAAPTSALP TASDSAGPCP VLDGAAATGF VPPFPQPGLV DVLDIDSSPP LPDELSCLVA  240
TFFEPSWPAQ HTLYGVIPDL APPLPVQDSE SLNCSIATCT VPLFPALDVA SRSAPLLPAQ  300
HAAAGAVVPD TAPPLRAHDT VPSAGPPATC STSSGCMSSM PWEHESAPSV VPSPIAATSV  360
VPRKQRHRSV TRRNPTWLPK SQFYEKPPAA PRAAPSSLKA GGNDKPLVAK RRRNRERDRV  420
CSHCSTTKTP QWRAGPRGPG TLCNACGLRY TDKGSLLETY RPTTSPSFDS GKHSNRQSKA  480
AKIMEKAELA KVMDDTYRRR LSESTPARRR INKLRRVQHS GSLTLTSLSR GREEALLRPA  540
GRARRIHGAL EPSRDRRQSA RTRAYPFCDF ACGLFIEPRP EAGKPSQAMP SKAGEQLQLV  600
TASKQPIEGG RTCVVAFAVS GLRYAATPQS LAFLMEQDHI SADV
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2069137