PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00791.1.g00340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 867aa MW: 97177.3 Da PI: 6.3796 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.8 | 7.4e-52 | 12 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lppGfrFhP+d+elv +yL +k++gk + +vd++k+ePwdLp+++ +++ewyfFs +d+kyatg+r+nra Zmw_sc00791.1.g00340.1.am.mk 12 LPPGFRFHPRDDELVLDYLYHKLSGKGggggAYGGINMVDVDLNKCEPWDLPEEACVGSREWYFFSLHDRKYATGQRTNRA 92 79************************988753333459999***********87777899********************* PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t+sgyWkatgkd+++ +++g++vg++ktLvfy+grap+g+kt+Wvmhe+r+ Zmw_sc00791.1.g00340.1.am.mk 93 TRSGYWKATGKDRPISRRRGAVVGMRKTLVFYQGRAPRGRKTEWVMHEFRV 143 *************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.27E-56 | 2 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.957 | 12 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-25 | 13 | 143 | IPR003441 | NAC domain |
Pfam | PF03343 | 1.2E-13 | 642 | 810 | IPR005011 | SNU66/SART1 family |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000398 | Biological Process | mRNA splicing, via spliceosome | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 867 aa Download sequence Send to blast |
MMSSISMVEA RLPPGFRFHP RDDELVLDYL YHKLSGKGGG GGAYGGINMV DVDLNKCEPW 60 DLPEEACVGS REWYFFSLHD RKYATGQRTN RATRSGYWKA TGKDRPISRR RGAVVGMRKT 120 LVFYQGRAPR GRKTEWVMHE FRVEGPAIAD AVAGSPLTED WVLCRVFYRS RTVTTRPAPA 180 DVEAGSLANE LITLPMPHAP PVDAYLLALD HAPAATIGGF YYQQDDDGGL PAAQGKTLSN 240 FRELLTSMVE RDGGAAAKPE LHQHHHHQDW TEAAYAAQQS AVAAQAWNPF LNSGSRNLPV 300 TEAGAEPVSK GIPSPAARSS RFAASAVPPP GSPVFARVRP LLVSPALGCQ QLPPFPSKPP 360 AQAFGTVVSI CALLRGVAAL NVEVSLVRII GDSLHCKTSS FCVLVPRQFG GSRDSPERSI 420 GWAGIRVSSM NRPSSCMEVD VGERHRDKER RERPKREEKD HHGSGRSDRD REKDKDDRRR 480 EKDESRHRDR DRERDREKDG KPRDRDKEAE RDRVRDRDRG KDREREPERP RDKDRGKDRD 540 REPDRDKERD RRDRDKERSR NRDREKDKAE RVERERDDRE REKLRGKGHV EDEADLSKGH 600 EGDQNAQGEV EQASTAELRE RIARLTQLAV LLLATFGKCA EEEELVFGDD YEDLQKSLEQ 660 ARKLALRKQE EPAASGPLAV VEMATANKGE EDADATERDV QQNKVVITEM EEFVWGLQLS 720 EESRKPEAGD VFMDEDDDAM PSDSPAKDDT NGLAPMEEET LQNEKSVTNE EEEVKPDDVI 780 HEVAVGKGLA GALKILKERG SLNEGTDWGG RTTDKKKSKL VGIEDGPKDI RIERLDEFGR 840 VVEHFLGIKR SAKSGSLPPP APKRPKN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-44 | 9 | 167 | 12 | 166 | Stress-induced transcription factor NAC1 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 443 | 452 | RHRDKERRER |
2 | 449 | 456 | RRERPKRE |
3 | 485 | 497 | RHRDRDRERDREK |
4 | 529 | 534 | PRDKDR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1012 | 37 | 138 |