PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00781.1.g00200.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 338aa MW: 36781.8 Da PI: 6.7212

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00781.1.g00200.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.3	1.9e-14	143	197	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 lk+ rr+ NRe+ArrsR+RK+ + Le v L+aeN +L k+l ++++++ Zmw_sc00781.1.g00200.1.sm.mkhc 143 NLKKMRRMLANRESARRSRRRKQIHLNDLESQVSMLTAENASLLKRLVDMTEKYK 197 68***************************************99977766666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.8E-14	141	205	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.829	143	195	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.8E-13	143	197	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.0E-12	145	197	No hit	No description
SuperFamily	SSF57959	2.32E-11	145	195	No hit	No description
PROSITE pattern	PS00036	0	148	163	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	3.2E-19	213	318	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MPFPVRIPPP RARMLPLGGC EARQKSGSFP RTAGFSGDEV AEVGCSYAAA LKRELDLYCA 60 AVAKSMDAKS QESSLGYPNS QASASSELIS QASFHGDRDG ASLFINSHII DNADSQGMSA 120 NTGILKEQSG DGDDLEEITN PANLKKMRRM LANRESARRS RRRKQIHLND LESQVSMLTA 180 ENASLLKRLV DMTEKYKDAT FDNQNLIVDL AMMRRKVHIA EEAVRVTGAS MLLPPTTSDM 240 PVSSMPLTSC ASDAASLAVP VQENMHPFLQ QPLIHGNQFK LDLPNATISL SSREMITMAV 300 SLRGVASMEN LQKRIHKDSV HSGTALPLSD PEALNDDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	164	RRSRRRKQ
2	159	164	SRRRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025805357.1	1e-123	light-inducible protein CPRF2-like
TrEMBL	A0A2T7EIZ5	1e-122	A0A2T7EIZ5_9POAL; Uncharacterized protein
STRING	Pavir.Cb00258.1.p	1e-116	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7595	29	43