PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00778.1.g00280.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 540aa MW: 58462.1 Da PI: 6.1496

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00778.1.g00280.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29	2.3e-09	223	281	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ ++ l +++ Zmw_sc00778.1.g00280.1.am.mk 223 KRVKRVLANRQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSSGLATQN 281 999******************************************99998887776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-16	219	283	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.714	221	284	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.9E-9	223	281	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.83E-10	223	273	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.6E-8	223	280	No hit	No description
CDD	cd14703	9.09E-24	224	273	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence Send to blast
MNGAANGHGM VHHHLHHHAQ ASAPLPTAFP LPAQHHQQQQ QGAGGGSKQR PGLPPTPPGF 60 HAVHADTEAG GGGWCLPGAG GDDLFNAYMT SMEGVDAGGL KYCSDGESRG SSMRTNGADS 120 SENESEDYGG ADSQFLVWGD GAGKKREGVK RNAAGEPAAS PAAGRHARSL SMDSLMGKLS 180 FSANGEPAGK FSLEFGGGEF TPAEMKRIMA DEKLAEMALA DPKRVKRVLA NRQSAARSKE 240 RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSSGLATQ NNELKFRLQA MEQQAQLRDA 300 LNEALSAEVH RLKVGDANSS SNLPKQMQLH YQSQMHELHK QQQGEQIPFY QLEQREQNGR 360 PTGTAVCWWQ CDALDGEKWQ SEREGLGRNT GTATEHGFDV ANRVATRERV VLPIRELMDA 420 PTLAMSVRAT CAMPAWARDR RTGLVTSQHL DEPPSAPLGA GSAAPRPYRH MPPVKTTSTR 480 SGLLGHHSVL LWAMGFDDEL EGEEVESVAS KELTEDCYGD NSCSETANED DMLLLIPTCC

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence Send to blast

MNGAANGHGM VHHHLHHHAQ ASAPLPTAFP LPAQHHQQQQ QGAGGGSKQR PGLPPTPPGF  60
HAVHADTEAG GGGWCLPGAG GDDLFNAYMT SMEGVDAGGL KYCSDGESRG SSMRTNGADS  120
SENESEDYGG ADSQFLVWGD GAGKKREGVK RNAAGEPAAS PAAGRHARSL SMDSLMGKLS  180
FSANGEPAGK FSLEFGGGEF TPAEMKRIMA DEKLAEMALA DPKRVKRVLA NRQSAARSKE  240
RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSSGLATQ NNELKFRLQA MEQQAQLRDA  300
LNEALSAEVH RLKVGDANSS SNLPKQMQLH YQSQMHELHK QQQGEQIPFY QLEQREQNGR  360
PTGTAVCWWQ CDALDGEKWQ SEREGLGRNT GTATEHGFDV ANRVATRERV VLPIRELMDA  420
PTLAMSVRAT CAMPAWARDR RTGLVTSQHL DEPPSAPLGA GSAAPRPYRH MPPVKTTSTR  480
SGLLGHHSVL LWAMGFDDEL EGEEVESVAS KELTEDCYGD NSCSETANED DMLLLIPTCC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012698006.1	1e-148	transcription factor RF2b
TrEMBL	A0A0E0MA28	1e-144	A0A0E0MA28_ORYPU; Uncharacterized protein
STRING	OPUNC10G15060.1	1e-144	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3536	35	76