PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00774.1.g00160.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 353aa    MW: 37092.9 Da    PI: 8.2813
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00774.1.g00160.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822209.11.2e-64131612148
                          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..ee 78 
                                     g++r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  e+
  Zmw_sc00774.1.g00160.1.sm.mkhc  13 GGTRVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPlaER 91 
                                     789************************************************************************999* PP

                          DUF822  79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148
                                     ++ +g+sas sp+ss+q        +sp++sy++sp+sssfps+ s+++i+l  +        +sl+p+l++ls++ss
  Zmw_sc00774.1.g00160.1.sm.mkhc  92 HDPIGRSASPSPCSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGSnfiggvegSSLIPWLKNLSSSSS 161
                                     *****************........99*****************9999999987789999999*********988655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.8E-7013157IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MTNGAGGGSG GLGGTRVPTW RERENNRRRE RRRRAIAAKI FAGLRAYGNY NLPKHCDNNE  60
VLKALCNEAG WTVEPDGTTY RKGCKPPLAE RHDPIGRSAS PSPCSSYQPS PRASYNPSPA  120
SSSFPSSGSS SHITLGGSNF IGGVEGSSLI PWLKNLSSSS SFASSSKFPQ LQHLYFNGGS  180
ISAPVTPPSS SPTRTPRIKT DWENPTVQPP WAGANYASLP NSTPPSPGHQ VAPDPAWLAG  240
FQISSAGPSS PTYSLVAPNP FGIFKETVAG SSRMCTPGQS GTCSPVMGGV PAQHDVQMVD  300
GAPDDFAFGS SSNGNIESSG LVKAWEGERI HEECASDELE LTLGSSKTRA DPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025813584.10.0protein BZR1 homolog 3
SwissprotQ5Z9E50.0BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A1E5VA880.0A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRINGPavir.J12085.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]