PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00767.1.g00280.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 263aa    MW: 28410.8 Da    PI: 7.6356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00767.1.g00280.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-1988138255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp +  k +r++lg+++ta eAa+a+++a+ +l+g
  Zmw_sc00767.1.g00280.1.am.mk  88 RYRGVRQRP-WGKYAAEIRDPAQ--KGARVWLGTYDTAVEAARAYDRAAFRLRG 138
                                   7********.**********944..44*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.85E-2988147No hitNo description
PROSITE profilePS5103224.61988146IPR001471AP2/ERF domain
PfamPF008472.7E-1388138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.4E-3288147IPR001471AP2/ERF domain
SMARTSM003809.6E-3888152IPR001471AP2/ERF domain
SuperFamilySSF541715.89E-2388147IPR016177DNA-binding domain
PRINTSPR003677.3E-1489100IPR001471AP2/ERF domain
PRINTSPR003677.3E-14128148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MALLQEHLDL IRAHLLEDGH DVAAGCVSSD SDGSTASPSP SPPGRRQVPA LSVTLPPRPA  60
TVVVHQQWAA APSLQVRHQQ GQEDDFRRYR GVRQRPWGKY AAEIRDPAQK GARVWLGTYD  120
TAVEAARAYD RAAFRLRGSK AILNFPNEVA FGAAARWAAP SAASLNNSYA AAAGNKRTRS  180
PEQSFQWEAA ESLRDVKKER VQEPAASCDY WAAGVAVAPA PASGGADFFW EEVEELKGTL  240
CSLPLLSPLS PHPHVAFPQL SVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2887152469ATERF1
3gcc_A4e-2887152469ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00556DAPTransfer from AT5G51190Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025796155.13e-89ethylene-responsive transcription factor ERF105-like
TrEMBLA0A3L6SDV48e-97A0A3L6SDV4_PANMI; Uncharacterized protein
STRINGPavir.Ib02259.1.p4e-87(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465