PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00763.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 482aa MW: 52662.9 Da PI: 9.9787

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00763.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.7	9.5e-12	210	234	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWtp+LH++Fv+a+++LGG+++ Zmw_sc00763.1.g00020.1.am.mk 210 PRLRWTPDLHHCFVHAIHKLGGQDR 234 8**********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.3E-10	206	235	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
LVRRCRARST ARRATRVRGD RIMVVGAARR RWIGDAALLY QGACARPSCN DACRSRSGLW 60 LFLHVATPAG CCCARRLHPG PRLDHLIDRS HVVASKRGYT RAQKQQYYYQ LLREERREEG 120 RGTGATDYSV QKARRSSAQQ SMGGVGVATI IACKPRTSGS YGSSCPSRGK EEEEEEVDKP 180 ESSTTMTMAR TVVGRERNGG VRQYNRSKVP RLRWTPDLHH CFVHAIHKLG GQDRMMMMQG 240 HRVDQEHVHG GCMELRTDTL LRRDHERGAP PPCRGCHAPK PGKEPMLCSP LKRKTDTPSC 300 EAEEAGRSTS PEYVLRGQGI CERDRSWSLY RALAAAAAAA ACGYNSMRTQ MQMQAAAMVV 360 ALPSPPHAEV EPRGIKRQQL AFLVAPPAGC CRRDHPFEMP GTAPAHRVAG TTNGLLPAGT 420 PRKARGSPPV DDDGCALSLS LALVDTTGSS SSGQCRTNSF EGSMRSSTTC SSGSRVSLDL 480 SL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

LVRRCRARST ARRATRVRGD RIMVVGAARR RWIGDAALLY QGACARPSCN DACRSRSGLW  60
LFLHVATPAG CCCARRLHPG PRLDHLIDRS HVVASKRGYT RAQKQQYYYQ LLREERREEG  120
RGTGATDYSV QKARRSSAQQ SMGGVGVATI IACKPRTSGS YGSSCPSRGK EEEEEEVDKP  180
ESSTTMTMAR TVVGRERNGG VRQYNRSKVP RLRWTPDLHH CFVHAIHKLG GQDRMMMMQG  240
HRVDQEHVHG GCMELRTDTL LRRDHERGAP PPCRGCHAPK PGKEPMLCSP LKRKTDTPSC  300
EAEEAGRSTS PEYVLRGQGI CERDRSWSLY RALAAAAAAA ACGYNSMRTQ MQMQAAAMVV  360
ALPSPPHAEV EPRGIKRQQL AFLVAPPAGC CRRDHPFEMP GTAPAHRVAG TTNGLLPAGT  420
PRKARGSPPV DDDGCALSLS LALVDTTGSS SSGQCRTNSF EGSMRSSTTC SSGSRVSLDL  480
SL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012698081.1	9e-52	uncharacterized protein LOC101766248
TrEMBL	A0A3L6TRH3	2e-52	A0A3L6TRH3_PANMI; Uncharacterized protein
STRING	Si036127m	3e-51	(Setaria italica)