PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc00753.1.g00310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 375aa MW: 40854.3 Da PI: 5.973 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.8e-11 | 177 | 235 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L ++++l+ + l+se+ Zmw_sc00753.1.g00310.1.sm.mkhc 177 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQMSMLQRDTSGLTSEK 235 9***********************************************99998888875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 173 | 237 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.001 | 175 | 238 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-10 | 177 | 234 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.66E-11 | 177 | 228 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-11 | 177 | 232 | No hit | No description |
CDD | cd14703 | 7.63E-23 | 178 | 227 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 375 aa Download sequence Send to blast |
MDQAPIVDPA AAASASTSSA AEAAASRDVA AMFPNSPLRR GAGHRRAQSE ILLGGALPDD 60 LTFDADLGVV GEAGRDEYEE DDDDDDEECA GGSSRMFEMF LENNGGLAEP TERSPHPHQQ 120 APPTAPTARP RHQHSMSMDG STSLGYSSAG MAGRSVADAK KAISDAKLAE LALVDPKRAK 180 RILANRQSAA RSKERKMRYI AELERKVQTL QTEATTLSTQ MSMLQRDTSG LTSEKSDLKM 240 RVLTMEQQVR LQDALNDRLR DEIQQLKIAT GQVNANITKM ENFDPSLYGG NPQSYQRTQI 300 QSLLAAQQLQ QLQIHSQHQR QQTHLQQQPL STAQQHQLRQ EAILFSGDHK MKGLATTSFS 360 QNAGASDGHA VNSEP |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | NP_001353704.1 | 1e-151 | uncharacterized protein LOC100382174 | ||||
Swissprot | Q04088 | 1e-80 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | C0PDU9 | 1e-150 | C0PDU9_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM2G112483_P01 | 1e-150 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Publications ? help Back to Top | |||
---|---|---|---|
|