PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00744.1.g00220.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 720aa MW: 77306.2 Da PI: 8.8108

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00744.1.g00220.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.1	3.8e-12	133	184	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 s+++GVr ++ +g ++AeIrdp +r kr ++g+f +eeAa+a++a +++++ e Zmw_sc00744.1.g00220.1.am.mk 133 SRFPGVRLRP-WGTYAAEIRDP----IRkKRKWIGSFLVEEEAAAAYEAQAREYRAE 184 689*****.******7....246**********************9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	2.2E-5	133	183	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	5.95E-12	133	184	IPR016177	DNA-binding domain
SMART	SM00380	8.0E-9	134	199	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.2E-15	134	183	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	16.147	134	193	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence Send to blast
MSPALLLLHG SDFPSPSSCT LLQFRQNGAR ACVFRLRIAR PSAVVNLDCT VAFPCSKRAV 60 VAMPAKVFVP LDSSDDEDDQ NIKKEKKVTR EVLIPVMDSK AALVPAKKSK ATKRKTTLLP 120 CDLKGPKKKE PSSRFPGVRL RPWGTYAAEI RDPIRKKRKW IGSFLVEEEA AAAYEAQARE 180 YRAELLAMRA QLPVSQSPAL SSSPSVSCDL PSVSGEKIAQ EAENRIFTEV VDSEPVDDLV 240 LHISDKPRDQ DLSMDVLSGL IEELPISDCI SRADELRHGG DFTSSEDTIL ISDFVDVTQM 300 PLDDDYIALA DISHLPLPIK DPEFDLGAEL DWKACAAARC WPSPAAVKTT TTSSRALDLF 360 LVSIAAAVLL FVASLFLWGF WPGRGRFFIF GAISGVFFTE EKKLRALLPA SALQWVQTAS 420 PAARQKAYSN SSFPYTRRTA VSPDLQSAAP ASVRGHAVAS PPDDHLLLFL GLRGRAVATA 480 FIGAPPGVAA RRAGAPHPDR GEPRDETRSL PEAAESTTAV EALPGAHHGA AARGESVVCA 540 LDEVPDPLCP ALLFLLVAGG GRFVRAAFIP VVSLVLLAGG VVRGYARLDD LLPPRPEAKH 600 DALQSAQQAR QRGERGQHDX XXXXSASSAA AIAGARENRP TPASSIAAAA VSIPSTAGKG 660 CNLRNGKKET ILTPTRHERR DKGIIFLLTL SRCVREQSSE RGKGRKGGGR KPRGGGDAAL

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence Send to blast

MSPALLLLHG SDFPSPSSCT LLQFRQNGAR ACVFRLRIAR PSAVVNLDCT VAFPCSKRAV  60
VAMPAKVFVP LDSSDDEDDQ NIKKEKKVTR EVLIPVMDSK AALVPAKKSK ATKRKTTLLP  120
CDLKGPKKKE PSSRFPGVRL RPWGTYAAEI RDPIRKKRKW IGSFLVEEEA AAAYEAQARE  180
YRAELLAMRA QLPVSQSPAL SSSPSVSCDL PSVSGEKIAQ EAENRIFTEV VDSEPVDDLV  240
LHISDKPRDQ DLSMDVLSGL IEELPISDCI SRADELRHGG DFTSSEDTIL ISDFVDVTQM  300
PLDDDYIALA DISHLPLPIK DPEFDLGAEL DWKACAAARC WPSPAAVKTT TTSSRALDLF  360
LVSIAAAVLL FVASLFLWGF WPGRGRFFIF GAISGVFFTE EKKLRALLPA SALQWVQTAS  420
PAARQKAYSN SSFPYTRRTA VSPDLQSAAP ASVRGHAVAS PPDDHLLLFL GLRGRAVATA  480
FIGAPPGVAA RRAGAPHPDR GEPRDETRSL PEAAESTTAV EALPGAHHGA AARGESVVCA  540
LDEVPDPLCP ALLFLLVAGG GRFVRAAFIP VVSLVLLAGG VVRGYARLDD LLPPRPEAKH  600
DALQSAQQAR QRGERGQHDX XXXXSASSAA AIAGARENRP TPASSIAAAA VSIPSTAGKG  660
CNLRNGKKET ILTPTRHERR DKGIIFLLTL SRCVREQSSE RGKGRKGGGR KPRGGGDAAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	707	715	GGRKPRGGG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5020	37	63