PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00736.1.g00250.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

CO-like

Protein Properties

Length: 787aa MW: 86406.5 Da PI: 10.101

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00736.1.g00250.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.5	1.8e-05	260	286	4	30
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedCl 30 r C+ ++ + ++l+C+ + +lC+ C Zmw_sc00736.1.g00250.1.am.mk 260 RPCDACGAEAARLYCRADAAFLCAGCX 286 68************************7 PP
2	CCT	67.8	2.9e-23	445	488	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+l+RY+eKrk+R+FeK+irY+sRKa+Ae+RpR+KGrF+k++ Zmw_sc00736.1.g00250.1.am.mk 445 REARLMRYREKRKSRRFEKTIRYASRKAYAETRPRIKGRFAKRT 488 9*****************************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50119	10.153	257	312	IPR000315	B-box-type zinc finger
CDD	cd00021	4.72E-5	260	285	No hit	No description
PROSITE profile	PS51017	16.876	445	487	IPR010402	CCT domain
Pfam	PF06203	2.9E-17	445	487	IPR010402	CCT domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0005515	Molecular Function	protein binding
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence Send to blast
MQPFSTTTTL AKYQSPEALD LQNVHDAIIL PLSVPPRAPI ADTAGEQPSR RPMEIRATSR 60 QPMARCHLFP RRLRRWEWDG RPPPTHGPPV PVASHNLPCL NARPIFLRQR PAFPHPARGR 120 RRCVNHRAYV PVGVGFYRLY RARSRGLDRS GEAGVRLGDG EARKAGTGKH GHWRTNSAPA 180 RRESDSRAPE TRSGSAQIRR GQRGRGSLAE NRFALSCPAA ATARYELHCR VRRCRQWRVI 240 AMAGDEKSSV GGSYWGLNTR PCDACGAEAA RLYCRADAAF LCAGCXXXXX XXXXXXXXXX 300 XXXXXXXXXX PVAPFYGSLA DAPKPFASSA AAAPKPGAAV DDDSSNEAEA ASWLLPEPDH 360 GQKDGSSAEV FFADSDTYLD LDFARSMDDV KAIGVQNCPP EMDLTGAKLF YPDHSVNHSV 420 SSSEAAVVPD AAAASAPVVS RGREREARLM RYREKRKSRR FEKTIRYASR KAYAETRPRI 480 KGRFAKRTSA VAGAGAEAEE EHDEEMYSSA AAAVAALLAP AAADVDYGVD GVVPTNYSLL 540 FGAVIYPPLR ALPACIARVH AKASYLYDYY DSTEAAMTSE LSLLPPIPTW KASPKAYADD 600 TSPALFIWAV RLCRNRGRDG LLVLCAQPSV PSDYPSERNR FVVDERGRAG KGRPWTTASY 660 PRRVACLGPR SSVRPARPTG GPHFCLRPPP LLAAADPFAC SVAESIRTSS AWLCPVRIVW 720 ATSAWLRDAR SSAAWHNGRV YARNGRARLV RTSAASRNRH VYTRNGRVIY AQNCRVYAQN 780 GCIHLPQ

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence Send to blast

MQPFSTTTTL AKYQSPEALD LQNVHDAIIL PLSVPPRAPI ADTAGEQPSR RPMEIRATSR  60
QPMARCHLFP RRLRRWEWDG RPPPTHGPPV PVASHNLPCL NARPIFLRQR PAFPHPARGR  120
RRCVNHRAYV PVGVGFYRLY RARSRGLDRS GEAGVRLGDG EARKAGTGKH GHWRTNSAPA  180
RRESDSRAPE TRSGSAQIRR GQRGRGSLAE NRFALSCPAA ATARYELHCR VRRCRQWRVI  240
AMAGDEKSSV GGSYWGLNTR PCDACGAEAA RLYCRADAAF LCAGCXXXXX XXXXXXXXXX  300
XXXXXXXXXX PVAPFYGSLA DAPKPFASSA AAAPKPGAAV DDDSSNEAEA ASWLLPEPDH  360
GQKDGSSAEV FFADSDTYLD LDFARSMDDV KAIGVQNCPP EMDLTGAKLF YPDHSVNHSV  420
SSSEAAVVPD AAAASAPVVS RGREREARLM RYREKRKSRR FEKTIRYASR KAYAETRPRI  480
KGRFAKRTSA VAGAGAEAEE EHDEEMYSSA AAAVAALLAP AAADVDYGVD GVVPTNYSLL  540
FGAVIYPPLR ALPACIARVH AKASYLYDYY DSTEAAMTSE LSLLPPIPTW KASPKAYADD  600
TSPALFIWAV RLCRNRGRDG LLVLCAQPSV PSDYPSERNR FVVDERGRAG KGRPWTTASY  660
PRRVACLGPR SSVRPARPTG GPHFCLRPPP LLAAADPFAC SVAESIRTSS AWLCPVRIVW  720
ATSAWLRDAR SSAAWHNGRV YARNGRARLV RTSAASRNRH VYTRNGRVIY AQNCRVYAQN  780
GCIHLPQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2191	32	72