PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00731.1.g00220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 307aa MW: 32548 Da PI: 5.1771 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.9 | 7.7e-17 | 137 | 188 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +kr +r+ +NRe+ArrsR+RK+a ++eLe+ v++L +eN +L k+l +++ Zmw_sc00731.1.g00220.1.sm.mkhc 137 VKRMKRMVSNRESARRSRKRKQAHLAELETQVDQLRGENASLFKQLTDANNQ 188 79****************************************9877666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.3E-18 | 134 | 198 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.105 | 136 | 188 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-14 | 137 | 188 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.06E-12 | 137 | 189 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-13 | 138 | 189 | No hit | No description |
CDD | cd14702 | 4.78E-23 | 139 | 189 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 141 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MKKCPSELEL EAFIGGGVDG DAEQKPGHVS QFDAGVMFQA GGGDLSAFSF ADSNTLNGTI 60 PSHLWSHNHG GARHPAISTT IESQSSICAA ASPISATNLN VKESQTLGGT SGSDSDSDSL 120 FDTEGGPYEQ STNPLDVKRM KRMVSNRESA RRSRKRKQAH LAELETQVDQ LRGENASLFK 180 QLTDANNQFT TAVTDNRILK SDVEALRLKV KLAEDMVARG AVSCGLGHMS LSPVLNPRQA 240 CRGPDVLAGL DFPGDDAYLT GLSPTEQVQN SPLQSIDNRM ASEVTSCGGA GVDVWGWDSH 300 SNGGLSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 156 | RRSRKRK |
2 | 150 | 157 | RRSRKRKQ |
3 | 152 | 157 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021315644.1 | 1e-174 | basic leucine zipper 9-like isoform X1 | ||||
Swissprot | Q6ETX0 | 1e-137 | RSBZ3_ORYSJ; bZIP transcription factor RISBZ3 | ||||
TrEMBL | A0A194YMZ4 | 1e-173 | A0A194YMZ4_SORBI; Uncharacterized protein | ||||
STRING | Sb04g005020.1 | 1e-173 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2095 | 37 | 96 |
Publications ? help Back to Top | |||
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