PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00723.1.g00230.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 362aa MW: 40169.9 Da PI: 9.0427

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00723.1.g00230.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	41.3	3.4e-13	43	68	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprl+WtpeLHerFveav+qLGG+e Zmw_sc00723.1.g00230.1.am.mk 43 KPRLKWTPELHERFVEAVNQLGGPEM 68 79*********************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.7E-11	41	67	IPR009057	Homeodomain-like
Pfam	PF14379	2.9E-9	99	120	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain
Pfam	PF14379	4.6E-11	184	208	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MYHQQQLESH KQHLSSRPSL PHEKQFLLQG GGDSGLILST DAKPRLKWTP ELHERFVEAV 60 NQLGGPEMSG SRTATDKLCE GNGSPSSHFA LEPQMNRSMH ISEALQMQIE VQRRLHEQLE 120 PLNPVPERGQ AARGGDGGRS YQPFRRPPVR LKKPGNQQWP RSNKRMGGDV RRRGIRPTRT 180 TYTVQRHLQL RIEAQGKYLQ SVLEKAQEAL AKQSVGVDGD VLGLEEDAAS FKAPHPLPRP 240 ELTANASTKR RQHGVGDGSV DSCLTACERD QHEMLSIGLC TTPRRSSQFG DGRRASEEYM 300 FLEEPSRGAS APGENRCGEI RRNDGLGNAR TAELLGLSIT HNSSSCPSRD GDRIDLNGST 360 WN

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MYHQQQLESH KQHLSSRPSL PHEKQFLLQG GGDSGLILST DAKPRLKWTP ELHERFVEAV  60
NQLGGPEMSG SRTATDKLCE GNGSPSSHFA LEPQMNRSMH ISEALQMQIE VQRRLHEQLE  120
PLNPVPERGQ AARGGDGGRS YQPFRRPPVR LKKPGNQQWP RSNKRMGGDV RRRGIRPTRT  180
TYTVQRHLQL RIEAQGKYLQ SVLEKAQEAL AKQSVGVDGD VLGLEEDAAS FKAPHPLPRP  240
ELTANASTKR RQHGVGDGSV DSCLTACERD QHEMLSIGLC TTPRRSSQFG DGRRASEEYM  300
FLEEPSRGAS APGENRCGEI RRNDGLGNAR TAELLGLSIT HNSSSCPSRD GDRIDLNGST  360
WN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0A9DHX6	1e-79	A0A0A9DHX6_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20987	4	4