PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00721.1.g00140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 304aa MW: 32870.7 Da PI: 7.3898 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.1 | 9.9e-25 | 116 | 175 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqK++ gs +prsYYrC ++ gC++kk +r+++dp++++++Y g+H++ Zmw_sc00721.1.g00140.1.sm.mk 116 DDGHSWRKYGQKPILGSIHPRSYYRCRHRhsqGCTAKKMAQRADDDPTLFDVIYYGTHTC 175 7**************************988889*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.4E-26 | 103 | 175 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.205 | 110 | 173 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.32E-24 | 112 | 175 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.3E-34 | 115 | 177 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.6E-24 | 116 | 175 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.3E-4 | 182 | 215 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-6 | 185 | 213 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.0E-6 | 185 | 213 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-6 | 185 | 213 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MERIVHGNEG GTRLVVTELS HIKDLVRQLE THLDGPHGRC KHLTSQIFSL AERSIGLITA 60 AGLDATHKRS GLASATPSAL GDFADVPLKS TKRRETMRKH QVRVKAAEGR EAPVDDDGHS 120 WRKYGQKPIL GSIHPRSYYR CRHRHSQGCT AKKMAQRADD DPTLFDVIYY GTHTCVDTTA 180 ATAGQGCTAK KMAQRADDDP TLFDVIYYGT HTCVDTTAAT AGQVTAPAPE HNPDSHNLPQ 240 SPCGGLTVKT EGLAAATKPQ NGNDNTTPFC STSASPVSWC LSPATTSDIA NEFFDIDVIA 300 NFFA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-19 | 116 | 175 | 9 | 68 | OsWRKY45 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 93 | LKSTKRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025800891.1 | 2e-72 | probable WRKY transcription factor 30 | ||||
TrEMBL | A0A1E5WLZ7 | 3e-75 | A0A1E5WLZ7_9POAL; Putative WRKY transcription factor 53 | ||||
STRING | Si030528m | 2e-71 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1086 | 38 | 131 |