PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00720.1.g00240.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 442aa MW: 48014.2 Da PI: 5.7697

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00720.1.g00240.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37	7.7e-12	295	320	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r+rWt++LHerFv+ v+qLGG+++ Zmw_sc00720.1.g00240.1.sm.mkhc 295 KTRIRWTQDLHERFVDSVNQLGGADR 320 68*********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-9	294	324	IPR009057	Homeodomain-like
Pfam	PF14379	7.8E-19	341	386	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence Send to blast
MISTGGTVDG SFDLDFSFLF LIKEIPKTQG VKYSIDICGY FDWLPEHKGF PIQFRDSVIT 60 AMNAKKIKLH DHHYGSQMFD PKLFQATAAA LSFHPGFVSS APQQDGGVGG WPPGEYSPTP 120 RSVLATQGGC VGSDTAAFFA AEDLLGMARF DCALPPVAAL KTAPFRRSQE ADQLYRSVDP 180 PLLRDDSVRT YYVPPQQREA AKAPPALKLP LQQHQLEQVQ GLFGNAFNAG LLLGGEPKNH 240 SFSPHVAAST LLPAIDAPSM QIPGENALSM SCSMGAPATH TSKVITLPGQ GAPSKTRIRW 300 TQDLHERFVD SVNQLGGADR KHEKRAAGND VLNLDPNTGE QITEALRVQL DVQRRLHEQL 360 AMQRNLQLKI EEQGKRLQKM FEEQLKASKS VLEPREQLQG AGAALDEVIG VGDEEDDACD 420 DVQLLSVASS GCNEAGFPSK IS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence Send to blast

MISTGGTVDG SFDLDFSFLF LIKEIPKTQG VKYSIDICGY FDWLPEHKGF PIQFRDSVIT  60
AMNAKKIKLH DHHYGSQMFD PKLFQATAAA LSFHPGFVSS APQQDGGVGG WPPGEYSPTP  120
RSVLATQGGC VGSDTAAFFA AEDLLGMARF DCALPPVAAL KTAPFRRSQE ADQLYRSVDP  180
PLLRDDSVRT YYVPPQQREA AKAPPALKLP LQQHQLEQVQ GLFGNAFNAG LLLGGEPKNH  240
SFSPHVAAST LLPAIDAPSM QIPGENALSM SCSMGAPATH TSKVITLPGQ GAPSKTRIRW  300
TQDLHERFVD SVNQLGGADR KHEKRAAGND VLNLDPNTGE QITEALRVQL DVQRRLHEQL  360
AMQRNLQLKI EEQGKRLQKM FEEQLKASKS VLEPREQLQG AGAALDEVIG VGDEEDDACD  420
DVQLLSVASS GCNEAGFPSK IS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004960202.1	1e-177	uncharacterized protein LOC101784276
Refseq	XP_004960204.1	1e-177	uncharacterized protein LOC101784276
TrEMBL	K3Z6D0	1e-176	K3Z6D0_SETIT; Uncharacterized protein
STRING	Si022099m	1e-177	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6933	37	51