PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00679.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 683aa MW: 74394 Da PI: 10.958

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00679.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.7	3.7e-07	611	650	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +iN+ +++L++llP+a + ++ s L++++ YIksL Zmw_sc00679.1.g00050.1.am.mk 611 EINELISRLQTLLPSARRRGGNQASTTKLLKETCSYIKSL 650 7************86667777**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.134	596	650	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.3E-7	610	667	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	6.15E-8	610	672	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.19E-4	610	654	No hit	No description
Pfam	PF00010	1.5E-4	611	650	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence Send to blast
MLALLPETKG VGSSAITPGA GKANKRMLPV GHGAGGEMWA ERGAVRWGRP AGGRSWPTYR 60 LQQWPVSPVD RGSRGAWHPH GAAPGAGDAG TRARSPPSWL HPLAIDDSGT CGSPPVQPAG 120 QRRKRRDGDF TGEHVPVPRA CLHRSRTDRV LLARWIDDVA SVGCAWPAGE CRTSTDYGPS 180 SSKDSRCVND KCAPSRPAFS SVDTCAAHLS GTITRPNDRG PLGPLGVSHW WGWIDGYLHR 240 REMDGELDDD GSRRAKSCGR DRDATGRNVR ELGRICACRA RYPWRARRRD LPIPPQRSRT 300 YECRAPCTAL SLVSRAHVAY SPGGRRRSSA AWRDPERGEW SLSIWLAAAA EPTHPASSTP 360 RAAVRSAPSH GPLAFADRPA RSHFHAVTTG RRWPGVPSTY VRAPGSRERG AREREPIHQR 420 YAPCPRAVTW TYVRAVAYII APGRPAPSTR EIRVRARTNG PVQQKWSKIC LRDRLAMTTM 480 WWSVLCCTPG IGTWQVEGEV GTQPQLITRP PTAGARGHPQ LRAGEGHLDP TDPNFLCRSG 540 QAAAAPCVSV LAAPPCRVSR APAAAYQNNL PAPSVLDLVG APRRTTFAFS SPTTTTTMSS 600 RRSRGGVSEE EINELISRLQ TLLPSARRRG GNQASTTKLL KETCSYIKSL HREVDDLSDR 660 LSDLMATMDQ NSPGAEIIRS LLR

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence Send to blast

MLALLPETKG VGSSAITPGA GKANKRMLPV GHGAGGEMWA ERGAVRWGRP AGGRSWPTYR  60
LQQWPVSPVD RGSRGAWHPH GAAPGAGDAG TRARSPPSWL HPLAIDDSGT CGSPPVQPAG  120
QRRKRRDGDF TGEHVPVPRA CLHRSRTDRV LLARWIDDVA SVGCAWPAGE CRTSTDYGPS  180
SSKDSRCVND KCAPSRPAFS SVDTCAAHLS GTITRPNDRG PLGPLGVSHW WGWIDGYLHR  240
REMDGELDDD GSRRAKSCGR DRDATGRNVR ELGRICACRA RYPWRARRRD LPIPPQRSRT  300
YECRAPCTAL SLVSRAHVAY SPGGRRRSSA AWRDPERGEW SLSIWLAAAA EPTHPASSTP  360
RAAVRSAPSH GPLAFADRPA RSHFHAVTTG RRWPGVPSTY VRAPGSRERG AREREPIHQR  420
YAPCPRAVTW TYVRAVAYII APGRPAPSTR EIRVRARTNG PVQQKWSKIC LRDRLAMTTM  480
WWSVLCCTPG IGTWQVEGEV GTQPQLITRP PTAGARGHPQ LRAGEGHLDP TDPNFLCRSG  540
QAAAAPCVSV LAAPPCRVSR APAAAYQNNL PAPSVLDLVG APRRTTFAFS SPTTTTTMSS  600
RRSRGGVSEE EINELISRLQ TLLPSARRRG GNQASTTKLL KETCSYIKSL HREVDDLSDR  660
LSDLMATMDQ NSPGAEIIRS LLR