PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc00651.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 417aa MW: 45263.2 Da PI: 7.5045 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.5 | 2.2e-11 | 135 | 176 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k++rr+++NReAAr+sR RKka+ie+Le ++L ++L Zmw_sc00651.1.g00070.1.am.mk 135 HKVQRRLAQNREAARKSRIRKKAYIEQLESSRAKLAHLEQEL 176 699**************************9888887766655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.5E-9 | 128 | 179 | No hit | No description |
SMART | SM00338 | 1.1E-7 | 132 | 220 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.37 | 134 | 178 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-8 | 135 | 176 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.53E-7 | 136 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 139 | 154 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.4E-29 | 210 | 285 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 417 aa Download sequence Send to blast |
MPACVFSRFL ARALAWTDAM WCEGPNPSSN SSSSLTAATF APPVATAYGG VAASLGMAAT 60 GTAMTDAGRF CPPWTQFENW GDSGVVVTSP LTETTSTDVD DSGDKRNAQM GGSSAQRVAV 120 NVDPSVVSKE RQGDHKVQRR LAQNREAARK SRIRKKAYIE QLESSRAKLA HLEQELQRAR 180 QQGMFIASGC SGALAFDMEY AGWLDEHQRH INDLRVALAA QMGDGDLRVL VDAVMSHYDQ 240 AFRLKALATR GDVFHVLSGM WVSPAERFFM WLGGFRPSEV LKAVAAQLEQ PTEQQLVGIC 300 NLQQTSQQAE DALSQGMEVL QQTLAETLAS AAVAGGGAGA GPADSVTNYV GQMAMAMAKL 360 GALENFLRQA DLLRQQTLEQ MRRILSTRQS ARALLVISDY FSRLRALSSL WLARPRD |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_014660509.2 | 0.0 | transcription factor TGAL3 | ||||
Swissprot | Q5Z6N9 | 1e-174 | TGAL3_ORYSJ; Transcription factor TGAL3 | ||||
TrEMBL | A0A0A9BRJ3 | 0.0 | A0A0A9BRJ3_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.J20659.1.p | 1e-178 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 |
Publications ? help Back to Top | |||
---|---|---|---|
|