PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00634.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 1491aa MW: 163312 Da PI: 9.8014

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00634.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	108.3	3.9e-34	244	298	6	60
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvPvGg++rk+ + Zmw_sc00634.1.g00020.1.am.mk 244 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPVGGSTRKRPR 298 68*************************************************9865 PP
2	zf-Dof	74	2e-23	310	346	14	50
zf-Dof 14 tntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50 +tkfCyynny+++qPr+fC+aCrryWt GG+lrn P Zmw_sc00634.1.g00020.1.am.mk 310 XDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNRP 346 69*********************************88 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.9E-29	244	296	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.615	244	298	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-21	245	291	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	246	282	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	19.312	302	356	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.1E-19	310	347	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	3.0E-12	311	342	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1491 aa Download sequence Send to blast
MHARRIAFEL LQHSTSGLSG LSLNYEGAGC WQGPACRTNL AGPPPFVHIA VWDFCPSPGG 60 APATRHAPIQ AAERGSFDPS RIVFGVTTRR SRQLFVSSTY TRKQRNVRST SSDWPRPCLS 120 LLSPALYLPP PYESTGCRAD EQSLLRERET NVYSIANPRS ELLTQEPTTS AMEAPLYHLP 180 VPIPAPGVPA LPATLRQHDT TIGAAIHQQQ QQQHQAAAVS AVITAQKKPP PLPPPPTVMV 240 TGREQCPRCA SRDTKFCYYN NYNTAQPRHF CRACRRYWTL GGSLRNVPVG GSTRKRPRPA 300 RPTRALXXXX DTKFCYYNNY NTAQPRHFCR ACRRYWTLGG SLRNRPRPAR PTRALAAAVA 360 TMSSSGTTTT TTTAAAPSCS GPGIFGGSPV PAPAQAPAPA QNGSLLSSLL LLCPATVLDG 420 DRAETTSKAG GAFPLPLPPA DALWQELAAA MPSAAGAGAP QPQPQLLLWA VLGLARPDSG 480 PPCRVPCLGR ILAASGDRHG PARHDGPAAR GTTVPGRHGM AQVPIGESSV DTSSGFDFRA 540 PGFPNFKRHS AGNGRIEAAR RRPPGRQVGT VIAILREAAV TDVDISPRRR LPPQVRTCFI 600 KVWEKFDFFD GLPGRRPPLP SSPSSLRTSP LPSTRFTAAV AAGRTSPPTQ SPKPYSPPPV 660 AVAGPPLLLM VRDAGAIRRA PARPSGAGVE GDADAPPGAT SRPPLRAIQP PASGAPRWPV 720 PTASKGLGFR AGKAPARVGA VSTSLAPRKP GPKPASRSGF TTAGTSSVGE PRSKVRDAIS 780 FWEENSSKVQ DQSSHSSAAQ EKDEVLRQAE IETAEIAEKR MAYAEEKDKE VKLLERSIED 840 HEITICELEN KDVSCTITRK QCMRMTLPVE EIVQGAKASE QPTVTVEPAL QTKYLDEPSE 900 QYSLDENLQE SKQTTVKMEE ASSSDYTNKS DEGYLPEISE LEQPRPNEHL EQHSVSGHPK 960 FCGVGVDNHQ SRSDSWLEEQ LSSPFLGPVV EIMEENELPL YATTRLDDPV NYMRAPSDEL 1020 KRLRRRNHYE RQRTATDRRF WSIEQQDLYD SIYSRAKLAD MKWIDWNHID SIEQFAGIRK 1080 RCVDLGLEQI TSYCCHWDSE LIRQFYSTVH ISADKTSMTW MTDGRKITTN KRAWEKRFGI 1140 PCGSHTEIHS QLFLNDDEKR KLYTAAEYTF GQINGLSPLA SVANKILRTT IYPRSGNKTH 1200 IWNIIYHIVK QQPFDIIALV FSEIDLLVSD HSRTKDQLLY APYIMGMIME AFDYKGPREF 1260 RHNSYKPRPI SKQKAAGATP AVKSRLELTR AVESHHKSHQ PAGYQPQVEA VQKRAAPVQP 1320 MTRSDLFQIV EDGLRPIRDA LASMEGRIGR VEDGASAPVR HINSSCSTSQ IPAPNSSLAP 1380 SVQSTLPPPQ APAISHFSGK PSVVHADNPS ASAQPVHPSK VPKVRSQPPV RCHVPNSNPV 1440 EKLRGPHRTD PNGQITPPPS QSNRRDSGAS SSRRRGKARE QRGEGESSRS F

Sequence ? help Back to Top

Protein Sequence Length: 1491 aa Download sequence Send to blast

MHARRIAFEL LQHSTSGLSG LSLNYEGAGC WQGPACRTNL AGPPPFVHIA VWDFCPSPGG  60
APATRHAPIQ AAERGSFDPS RIVFGVTTRR SRQLFVSSTY TRKQRNVRST SSDWPRPCLS  120
LLSPALYLPP PYESTGCRAD EQSLLRERET NVYSIANPRS ELLTQEPTTS AMEAPLYHLP  180
VPIPAPGVPA LPATLRQHDT TIGAAIHQQQ QQQHQAAAVS AVITAQKKPP PLPPPPTVMV  240
TGREQCPRCA SRDTKFCYYN NYNTAQPRHF CRACRRYWTL GGSLRNVPVG GSTRKRPRPA  300
RPTRALXXXX DTKFCYYNNY NTAQPRHFCR ACRRYWTLGG SLRNRPRPAR PTRALAAAVA  360
TMSSSGTTTT TTTAAAPSCS GPGIFGGSPV PAPAQAPAPA QNGSLLSSLL LLCPATVLDG  420
DRAETTSKAG GAFPLPLPPA DALWQELAAA MPSAAGAGAP QPQPQLLLWA VLGLARPDSG  480
PPCRVPCLGR ILAASGDRHG PARHDGPAAR GTTVPGRHGM AQVPIGESSV DTSSGFDFRA  540
PGFPNFKRHS AGNGRIEAAR RRPPGRQVGT VIAILREAAV TDVDISPRRR LPPQVRTCFI  600
KVWEKFDFFD GLPGRRPPLP SSPSSLRTSP LPSTRFTAAV AAGRTSPPTQ SPKPYSPPPV  660
AVAGPPLLLM VRDAGAIRRA PARPSGAGVE GDADAPPGAT SRPPLRAIQP PASGAPRWPV  720
PTASKGLGFR AGKAPARVGA VSTSLAPRKP GPKPASRSGF TTAGTSSVGE PRSKVRDAIS  780
FWEENSSKVQ DQSSHSSAAQ EKDEVLRQAE IETAEIAEKR MAYAEEKDKE VKLLERSIED  840
HEITICELEN KDVSCTITRK QCMRMTLPVE EIVQGAKASE QPTVTVEPAL QTKYLDEPSE  900
QYSLDENLQE SKQTTVKMEE ASSSDYTNKS DEGYLPEISE LEQPRPNEHL EQHSVSGHPK  960
FCGVGVDNHQ SRSDSWLEEQ LSSPFLGPVV EIMEENELPL YATTRLDDPV NYMRAPSDEL  1020
KRLRRRNHYE RQRTATDRRF WSIEQQDLYD SIYSRAKLAD MKWIDWNHID SIEQFAGIRK  1080
RCVDLGLEQI TSYCCHWDSE LIRQFYSTVH ISADKTSMTW MTDGRKITTN KRAWEKRFGI  1140
PCGSHTEIHS QLFLNDDEKR KLYTAAEYTF GQINGLSPLA SVANKILRTT IYPRSGNKTH  1200
IWNIIYHIVK QQPFDIIALV FSEIDLLVSD HSRTKDQLLY APYIMGMIME AFDYKGPREF  1260
RHNSYKPRPI SKQKAAGATP AVKSRLELTR AVESHHKSHQ PAGYQPQVEA VQKRAAPVQP  1320
MTRSDLFQIV EDGLRPIRDA LASMEGRIGR VEDGASAPVR HINSSCSTSQ IPAPNSSLAP  1380
SVQSTLPPPQ APAISHFSGK PSVVHADNPS ASAQPVHPSK VPKVRSQPPV RCHVPNSNPV  1440
EKLRGPHRTD PNGQITPPPS QSNRRDSGAS SSRRRGKARE QRGEGESSRS F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	298	KRPRP
2	559	566	RRRPPGRQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15859	2	2