PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00622.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

TCP

Protein Properties

Length: 487aa MW: 51705.7 Da PI: 9.3133

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00622.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.6	2e-33	261	356	8	89
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsss 87 ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a +c+++ s s+as s Zmw_sc00622.1.g00110.1.am.mk 261 SKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvFSCSSAPSTSAAS---S 338 79********************************************************8888844442222222222...1 PP TCP 88 g................k 89 + Zmw_sc00622.1.g00110.1.am.mk 339 FllgkrprqdvvvaheaA 356 122223333344443331 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	7.2E-30	260	359	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	26.808	261	315	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence Send to blast
MHLRTTGGVD LLSTDAAHGA VDTRPWSPTI PVQPVHLAST ATSPGAGRTT PAGGQWSRLG 60 STCFKHAASG QANEPSILPM IQPRTQSGLH ARLQLHRSAI ATGSQPHTVV YCHCSLRRFL 120 QLVPPQQQGP VYPLLDNRRG ATCRRHNKVR AADRTQRPMC PVPLYAQCCA ACPSPLSLIS 180 SDARRPGTCA ARQDPYPYPS IPITATPQPS CPPTHSTPRT TKAMASRDDA AATFHVYGAL 240 PAAASTDAVT PAAKKPPSAG SKDRHSKVNG RGRRVRMPIV CAARVFQLTR ELGLKSDGQT 300 IEWLLRQAEP SILAATGSGT TPAVFSCSSA PSTSAASSFL LGKRPRQDVV VAHEAAAAPQ 360 PPFWAALQAR PVAWGLSPAQ EQQAYASVAQ GHHLNLLSVL SSATRPAEES SRDAGKVVPN 420 SFDVNGLICV LCILGECVHT HMLNQEHEWM VHLSLISGEA EAERSGRRHD LSSRESDPPG 480 CGLVAAS

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence Send to blast

MHLRTTGGVD LLSTDAAHGA VDTRPWSPTI PVQPVHLAST ATSPGAGRTT PAGGQWSRLG  60
STCFKHAASG QANEPSILPM IQPRTQSGLH ARLQLHRSAI ATGSQPHTVV YCHCSLRRFL  120
QLVPPQQQGP VYPLLDNRRG ATCRRHNKVR AADRTQRPMC PVPLYAQCCA ACPSPLSLIS  180
SDARRPGTCA ARQDPYPYPS IPITATPQPS CPPTHSTPRT TKAMASRDDA AATFHVYGAL  240
PAAASTDAVT PAAKKPPSAG SKDRHSKVNG RGRRVRMPIV CAARVFQLTR ELGLKSDGQT  300
IEWLLRQAEP SILAATGSGT TPAVFSCSSA PSTSAASSFL LGKRPRQDVV VAHEAAAAPQ  360
PPFWAALQAR PVAWGLSPAQ EQQAYASVAQ GHHLNLLSVL SSATRPAEES SRDAGKVVPN  420
SFDVNGLICV LCILGECVHT HMLNQEHEWM VHLSLISGEA EAERSGRRHD LSSRESDPPG  480
CGLVAAS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1941	33	100