PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00606.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 360aa    MW: 39781.3 Da    PI: 6.6336
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00606.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17120171156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   s+y+GVr+++ +g+W+AeIrdp    +r kr ++g+++t+eeAa+a++a +++++ e
  Zmw_sc00606.1.g00080.1.am.mk 120 SRYRGVRRRP-WGKWAAEIRDP----IRkKRNWIGSYDTEEEAAAAYEALARQYRAE 171
                                   79********.**********7....246***********************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-11120171IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-17120171IPR016177DNA-binding domain
CDDcd000181.52E-15120153No hitNo description
PROSITE profilePS5103220.415121180IPR001471AP2/ERF domain
SMARTSM003802.2E-16121186IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-20121170IPR001471AP2/ERF domain
PRINTSPR003677.3E-9122133IPR001471AP2/ERF domain
PRINTSPR003677.3E-9144160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MSPALLPLHG SELYVATSRV LLLPSPPASA EGRQGLRVPL QDLTVRIFCS DPDATDSSGD  60
EGDRNIQKEK KMMREVLVPL TNSAAVLVPV KKSKAKKSEM ILLPCGTKVL KGPEKKGASS  120
RYRGVRRRPW GKWAAEIRDP IRKKRNWIGS YDTEEEAAAA YEALARQYRA EVLAMKGQLP  180
VSQPAALSNS SSVSCVLPAE SCKRIAQEAQ NSVFVEIDSE PGNEILLDFS DTPRAKDVSL  240
DVLLGRLDER PVSDSISRPD ELRHDGFTNS GDMFPISDFG VTHKPLDNDY IGLADISHLP  300
LPMDDPEFDL DAALDWSGFD FTAMGRMIHG IWRPIGLQFL SGIDRHRQHP TCPVTRAPFR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125144RRRPWGKWAAEIRDPIRKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-101ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-101ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-101ethylene-responsive transcription factor ERF021
TrEMBLA0A0A9DCI81e-101A0A0A9DCI8_ARUDO; Uncharacterized protein
STRINGSi030741m1e-100(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763