PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00575.1.g00380.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 793aa MW: 87030 Da PI: 10.3944

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00575.1.g00380.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	3e-28	164	213	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ Zmw_sc00575.1.g00380.1.am.mk 164 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 213 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-24	162	213	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.04E-12	162	213	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.0E-20	164	214	IPR006447	Myb domain, plants
Pfam	PF00249	1.6E-5	165	213	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence Send to blast
MELFPAHPDL QLQISPPVSK PMDLGFWKRA LDSTPVATST PAATAAATTS PSSMAIASPA 60 PTGVGGFHPG AGAVHHQGAL PFVHHTQPIL PGSSGLRDLA SMRPIRGIPV YNASQAPLPF 120 LQSHPHSHQQ HCYDAIVGGV AWSRSPKAAL RLAGAPVKRG ARAPRMRWTT SLHARFVHAV 180 ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQLSTKHAM HAIKSHTGEE EAAIEFSRKL 240 HGRAGIRHPH HTRTTPQQRG RSIDTHTAQK EMYRTIKTTD HRPASASCYG QAAAKTVIDI 300 SDDNQFDVSN TTSRSESSPQ QSNPDNANEH GSSMCALWSN SSMRGAWFQL DKSSKDAAPS 360 DIKSFEVQLI VAVPSHRDAD QRQKETEPGL QPRTDITHRA VDTSTGPTRK KDGLAGYLWR 420 SNRVVKWLPL PLLLYDLTVV VACTMANTST HAEADRKSTR RVDPAIRPMH QPPCYGHRAC 480 TNGRVRAIAR CNEEGGGGGW DADGWTYAPP CTRPAAEGRA ACRDQTEMEE EEEKLRHAHA 540 YTEALGRSAL VRASASFCES ASEQARRVRT CPWGRDATAP LATARLACFE FALTLKQKYF 600 IIVFAGPLRS RPGSNSREDT REERDVSSRQ AKTLWDGSSG WRRAEQSRAV SSRASLWPRS 660 RRLKEACSVG GQWTEIRIRP LRRRSDHTSS YAFACPPLYA SPGTRGPNPL PPPVLSAALP 720 RPFGRIDRLV RRPAFGRWRR RSEGASSFQF LVDSHRSAPR ERRGDAAHRL ACGIAEMGKG 780 GDLWDDSALV NAF

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence Send to blast

MELFPAHPDL QLQISPPVSK PMDLGFWKRA LDSTPVATST PAATAAATTS PSSMAIASPA  60
PTGVGGFHPG AGAVHHQGAL PFVHHTQPIL PGSSGLRDLA SMRPIRGIPV YNASQAPLPF  120
LQSHPHSHQQ HCYDAIVGGV AWSRSPKAAL RLAGAPVKRG ARAPRMRWTT SLHARFVHAV  180
ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQLSTKHAM HAIKSHTGEE EAAIEFSRKL  240
HGRAGIRHPH HTRTTPQQRG RSIDTHTAQK EMYRTIKTTD HRPASASCYG QAAAKTVIDI  300
SDDNQFDVSN TTSRSESSPQ QSNPDNANEH GSSMCALWSN SSMRGAWFQL DKSSKDAAPS  360
DIKSFEVQLI VAVPSHRDAD QRQKETEPGL QPRTDITHRA VDTSTGPTRK KDGLAGYLWR  420
SNRVVKWLPL PLLLYDLTVV VACTMANTST HAEADRKSTR RVDPAIRPMH QPPCYGHRAC  480
TNGRVRAIAR CNEEGGGGGW DADGWTYAPP CTRPAAEGRA ACRDQTEMEE EEEKLRHAHA  540
YTEALGRSAL VRASASFCES ASEQARRVRT CPWGRDATAP LATARLACFE FALTLKQKYF  600
IIVFAGPLRS RPGSNSREDT REERDVSSRQ AKTLWDGSSG WRRAEQSRAV SSRASLWPRS  660
RRLKEACSVG GQWTEIRIRP LRRRSDHTSS YAFACPPLYA SPGTRGPNPL PPPVLSAALP  720
RPFGRIDRLV RRPAFGRWRR RSEGASSFQF LVDSHRSAPR ERRGDAAHRL ACGIAEMGKG  780
GDLWDDSALV NAF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	4e-13	165	213	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-13	165	213	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-13	165	213	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-13	165	213	3	51	Protein PHOSPHATE STARVATION RESPONSE 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9438	34	45