PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00522.1.g00340.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 209aa    MW: 22273.2 Da    PI: 8.0362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00522.1.g00340.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.71.4e-134791755
                           AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  r+++ +grW+Ae+r+p++   r r ++g+f t++eAa a++aa  +++g
  Zmw_sc00522.1.g00340.1.am.mk 47 RRRE-WGRWAAELRVPNT---RERLWIGTFATPKEAAHAYDAAVFCFYG 91
                                  5555.**********944...5*********************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.11242103IPR001471AP2/ERF domain
SMARTSM003801.0E-1942109IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-1543103IPR016177DNA-binding domain
PRINTSPR003674.6E-64354IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-2244104IPR001471AP2/ERF domain
CDDcd000181.31E-1944105No hitNo description
PfamPF008478.6E-84789IPR001471AP2/ERF domain
PRINTSPR003674.6E-66581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MATAAAASSG SSGAASVGKK ARRRRGGRSS SATATAMPKN LGWVGARRRE WGRWAAELRV  60
PNTRERLWIG TFATPKEAAH AYDAAVFCFY GDNIPRIRRL NFPTAPRPDV PEDVRAKLTV  120
ANIKAIAEKY ARDLADYIPP PPVFLEAAPQ VVEAAPAAVD ASIGVGAAPT ADCGSVDETA  180
VDMSIADCLL SFNDGPVEFD DILNFENIK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008666485.14e-43ethylene-responsive transcription factor ERF015
TrEMBLA0A060D1449e-42A0A060D144_MAIZE; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A317Y0949e-42A0A317Y094_MAIZE; Ethylene-responsive transcription factor ERF015
STRINGGRMZM2G033656_P012e-42(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555