PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00522.1.g00320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 286aa MW: 29964.3 Da PI: 8.9435 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.9 | 1.1e-12 | 114 | 157 | 9 | 55 |
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++grW++eIr p++ r++ ++g+f t+eeAa a++aa +++g Zmw_sc00522.1.g00320.1.am.mk 114 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 157 678**********965...4*********************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.372 | 106 | 169 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.88E-19 | 112 | 171 | No hit | No description |
SMART | SM00380 | 5.9E-18 | 114 | 175 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.3E-7 | 114 | 157 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-13 | 114 | 169 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.1E-19 | 114 | 170 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MARKLVALWP CHVARVVVVT ELVSHLSPLA SSPLHSHTAS LSSFDLLVVR GSCLVPFLLA 60 ASVVSMAGAA ASRATGVAGM GNGRSTAPQG NNHGALSGAG GGGGPKNLGW LGARRRQGRW 120 ASEIRMPRTR AKLWIGTFAT PEEAALAYDA AVFCFYGARV PDSRRLNFPT APRPNISENM 180 RVRLTVSNIK AIAEHYARTL AVYLVPPPPP VLLPVPAPAP AVPAPMMVNE APVEATAASA 240 AGAACATTNH GNVNAKDVDS GAATVEDYFL NFNPEEFDFD HLMADI |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |