PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00514.1.g00170.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 435aa MW: 48637.4 Da PI: 11.7821

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00514.1.g00170.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.8e-50	265	389	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtd elv++yL++k++g +l + vi+evd+yk++Pw+Lp+k+ ++ekewyfFs+rd+ky++g+r+nra+ +g Zmw_sc00514.1.g00170.1.am.mk 265 LPPGFRFHPTDGELVNYYLCRKCAGLPLAA-PVIAEVDLYKFDPWQLPEKAMGGEKEWYFFSPRDRKYPNGSRPNRAAGTG 344 79***********************999.89***********8888999********************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg dk+v s + v +kk Lvfy g+ pkg+kt+W+mheyrl Zmw_sc00514.1.g00170.1.am.mk 345 YWKATGADKPVGS--PRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL 389 *******99..779*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-56	261	394	IPR003441	NAC domain
PROSITE profile	PS51005	53.589	265	412	IPR003441	NAC domain
Pfam	PF02365	3.1E-25	266	389	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
LRKLRCLSVV RPVPSRGRVS PRRGRSLGDR EPCDAAARHV TSRSRRVHAS DDRDQTKPSK 60 ARDPGHCAAR ERSARLSARG GSRRPRLLPP RSSGLEINPP ASARPRQPSP ATKLLTQAMT 120 KSRPALDPHR RIRPPTRRAR LRDARRASSR ALGQTSLERQ LARASHRPSV DTCPAAVYIV 180 APGTASWCST HAYSRSPERP DTLTQRERER ERESSLPSSS GSVLLLRRRP PSPRDPTRSS 240 VRPATHPPTS LDRTLEMDCG DALQLPPGFR FHPTDGELVN YYLCRKCAGL PLAAPVIAEV 300 DLYKFDPWQL PEKAMGGEKE WYFFSPRDRK YPNGSRPNRA AGTGYWKATG ADKPVGSPRP 360 VAIKKALVFY AGKPPKGVKT NWIMHEYRLA DVDRSAAARK RTNNALRHAP YRAVPFDPAC 420 GWLRRLSQQT SLTFR

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

LRKLRCLSVV RPVPSRGRVS PRRGRSLGDR EPCDAAARHV TSRSRRVHAS DDRDQTKPSK  60
ARDPGHCAAR ERSARLSARG GSRRPRLLPP RSSGLEINPP ASARPRQPSP ATKLLTQAMT  120
KSRPALDPHR RIRPPTRRAR LRDARRASSR ALGQTSLERQ LARASHRPSV DTCPAAVYIV  180
APGTASWCST HAYSRSPERP DTLTQRERER ERESSLPSSS GSVLLLRRRP PSPRDPTRSS  240
VRPATHPPTS LDRTLEMDCG DALQLPPGFR FHPTDGELVN YYLCRKCAGL PLAAPVIAEV  300
DLYKFDPWQL PEKAMGGEKE WYFFSPRDRK YPNGSRPNRA AGTGYWKATG ADKPVGSPRP  360
VAIKKALVFY AGKPPKGVKT NWIMHEYRLA DVDRSAAARK RTNNALRHAP YRAVPFDPAC  420
GWLRRLSQQT SLTFR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-67	256	389	6	140	Stress-induced transcription factor NAC1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP67654	2	2