PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00482.1.g00380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 207aa MW: 22645.2 Da PI: 11.6354 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.4 | 4.3e-30 | 20 | 163 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 lppGfrF+Ptdeelv +yL++k+ g +l++++vi+ v d+y ++Pwd+p a++ e yfF+ r + r++ Zmw_sc00482.1.g00380.1.sm.mk 20 LPPGFRFKPTDEELVLQYLRRKALGVPLPAADVITVVrDLYGLDPWDIP---GASDGEKYFFAIRPAAGVDRPRAKT--Gg 95 79*********************************999***********...3467899*****9998765444444..23 PP NAM 80 ....sgyWkatgkdkevlsk....kgelvglkktLvfy...........kgrapkgektdWvmheyrl 128 sg+Wk gk+++v+ ++ l+g k+ L+f +++a g t Wvmheyrl Zmw_sc00482.1.g00380.1.sm.mk 96 ampaSGRWKPEGKERPVVLPrpcgGSLLIGAKRALAFAprrrgkkstnkQASAAAGLTTGWVMHEYRL 163 34459*************9989877778**********9998887776556788888*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.23E-34 | 16 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 35.134 | 20 | 180 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-19 | 21 | 163 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MERAPALVRH AGGVATLRQL PPGFRFKPTD EELVLQYLRR KALGVPLPAA DVITVVRDLY 60 GLDPWDIPGA SDGEKYFFAI RPAAGVDRPR AKTGGAMPAS GRWKPEGKER PVVLPRPCGG 120 SLLIGAKRAL AFAPRRRGKK STNKQASAAA GLTTGWVMHE YRLATALLHK NTLLFQWNHH 180 TTVTSESSVG GRWHKLLRSS RRSVSIA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-20 | 19 | 163 | 14 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001147463.1 | 1e-70 | uncharacterized LOC100281072 | ||||
TrEMBL | B6SRZ1 | 2e-69 | B6SRZ1_MAIZE; NAC domain-containing protein 68 | ||||
STRING | Si014408m | 4e-69 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11818 | 31 | 40 |