PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00463.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 311aa    MW: 33348.9 Da    PI: 10.2016
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00463.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33.1e-32167220255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Zmw_sc00463.1.g00070.1.sm.mk 167 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 220
                                   9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.4E-29165220IPR009057Homeodomain-like
SuperFamilySSF466891.97E-15165221IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23167221IPR006447Myb domain, plants
PfamPF002491.5E-7168219IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0048481Biological Processplant ovule development
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MELFPAHPDL QLQISPPPTT KPMDLGFWKR ALDSTPVATS TAETLATATT PPPSMSIATY  60
APTGVGVGGF HQAAAAGAGH HLGALPFLHH TQPVLPADAS GLRDLAAMRP IRGIPVYNTS  120
QPLPFLQSHP HHHQHWYDAI GHAAGPRSPK AALRLAGAPV KRGARAPRMR WTTSLHARFV  180
HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT IKTTDHKPAS ASSYGQAAAK  240
TVIDSPDDNL LDATTNTTSG SESSAQQSNP DGNDHGSSMC ALWSNSSIRF MRSLQVKRLS  300
VVLLKAQTKY P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-16168222458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811921.11e-145probable transcription factor KAN2 isoform X1
RefseqXP_025811930.11e-145probable transcription factor KAN2 isoform X2
TrEMBLA0A1E5VN241e-146A0A1E5VN24_9POAL; Putative transcription factor KAN2
STRINGPavir.Ab02797.1.p1e-137(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94383445