PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00457.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 496aa    MW: 53173 Da    PI: 8.5713
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00457.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.47.8e-191482147
                                  TSSS-HHHHHHHHHHHHHTTTT.......................-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.......................tWktIartmgkgRtlkqcksrwqky 47
                                  +g+WT+eEde+lv ++k++G g                       +W++Ia++++ gRt++++k++w+++
  Zmw_sc00457.1.g00070.1.am.mk 14 KGPWTAEEDEKLVAYIKKHGQGnwrtlpknaaslaslpprdttvvRWSAIAARLP-GRTDNEIKNYWNTH 82
                                  79*****************************************************.************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.6E-23591IPR009057Homeodomain-like
PROSITE profilePS5129418.185987IPR017930Myb domain
SuperFamilySSF466891.56E-141179IPR009057Homeodomain-like
SMARTSM007175.4E-191385IPR001005SANT/Myb domain
PfamPF002499.9E-161482IPR001005SANT/Myb domain
CDDcd001671.10E-131683No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MGRAPCCDKT GLKKGPWTAE EDEKLVAYIK KHGQGNWRTL PKNAASLASL PPRDTTVVRW  60
SAIAARLPGR TDNEIKNYWN THIRKRLLRM GIDPVTHAPR LDLLDLSGLL KPAAHAAPAY  120
YPTQADLDAL RALEPLASYP DLLRLASTLL SGTVQAPAVA DQQLLLPWLL HQAQMTQQAA  180
AMAPQEVVPM QADHQFMQPA ASNAPCQVPG LVHTNQTTIQ QTGAAQQQQL QDIPAASSYV  240
DSLLDMPALM QMVQQQQSDA SNMQQHWSST ATSSNNNVGG SGVSTPSSSP VTRLSNNNST  300
TSTTTTYGAT TTNDAATLFN MPLSDLLDTA AVPLVPHHGL VSGEEKQGAL RSERWTNVYA  360
AFARTQATQD TSCVSTDGDR TVTTSLTCRK GIDRTDQHWH ARRRPPTRPR GSTGAKLNLG  420
LKQVAPFDPQ THTTTTKATA GLLLPHATAT ACPLLTSAKA TATLSPLAKA TTTAGHILLD  480
ATGPCECLHA EMHSAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1401408RRRPPTRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802158.11e-106transcription factor MYB102-like
TrEMBLA0A2S3H3C91e-105A0A2S3H3C9_9POAL; Uncharacterized protein
STRINGMLOC_62436.11e-103(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563