PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00405.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 306aa MW: 33429 Da PI: 10.6842

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00405.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35	3e-11	132	173	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ +rk++NR++A+rsR+RK+ +++ L+ v++L a N aL Zmw_sc00405.1.g00110.1.am.mk 132 RKRKRKESNRLSAQRSRARKQRQLDDLTAHVAALRARNGALT 173 6789**********************************9996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-7	125	211	No hit	No description
SMART	SM00338	7.1E-9	128	192	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	130	172	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.88E-8	132	178	No hit	No description
Pfam	PF00170	1.1E-8	132	173	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.23E-15	133	183	No hit	No description
PROSITE pattern	PS00036	0	135	150	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MDQGRARPGQ AKPGWARSGG VGPGRVRPSR SSPSEEHIPP KLCPDFLWPF DASGRITEHT 60 AAAPLLIPEF MITSTILVQS FSIVFLYWFY NMASPGMMSS TVTASPSPSP AGSDSAYQAQ 120 HAAVPASVTE ERKRKRKESN RLSAQRSRAR KQRQLDDLTA HVAALRARNG ALTTAAHDAV 180 RRCVAVQAEN EMLRARSLEL GARLQSLLQL IQYMDAATSA LAVYDPSPFA GAMLHQQPLL 240 DATIQKSFAT AKKWSARSSE GKQKDPAKVI DPFLSRWGSD EIFGKRQIIC NGREEGSGGP 300 GRWRFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	136	RKRKRK
2	131	137	RKRKRKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025818325.1	2e-38	bZIP transcription factor 44-like
TrEMBL	A0A1E5VQF2	1e-40	A0A1E5VQF2_9POAL; Uncharacterized protein
STRING	Pavir.Ea01670.1.p	4e-38	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13757	24	28