PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00359.1.g00110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 438aa MW: 48102.7 Da PI: 5.1952 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.7 | 1.3e-33 | 230 | 284 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv+av+qLGGsekAtPk +l+lmkv++Lt+ hvkSHLQkYR+ Zmw_sc00359.1.g00110.1.am.mkhc 230 KQRMRWTPELHECFVDAVNQLGGSEKATPKGVLKLMKVDDLTIFHVKSHLQKYRT 284 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.785 | 227 | 287 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.2E-31 | 228 | 286 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.53E-18 | 229 | 284 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-25 | 230 | 284 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.5E-9 | 232 | 283 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 3.2E-24 | 313 | 360 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence Send to blast |
MQKFNLMQSQ NSRVVGAMSS SLPVLPNAMK ESLPKPHNPH YLPMSRQLLN DSIPLCHGAL 60 QSTPLHPRDG VIGSPFANYC ASQNDSVSNH ERQSIVASFI SRAANIEVFE PLSDNDIDAQ 120 TEAAWFTSSM DVLPGYIDNV AAPDNQIQSG ISAIASTEIA NQNELWEQLM NDDWKDILDA 180 TATDSQSKTM VQHSNSTASQ PAMNQPASSL SGEICPVASP PNSSNASAAK QRMRWTPELH 240 ECFVDAVNQL GGSEKATPKG VLKLMKVDDL TIFHVKSHLQ KYRTARYKPD LSEGSSEKRT 300 TTEELSFDLK TSMDLTEALR LQMDVQKRLH EQLENQRKLQ LRIEEQGKYL QMMLEKQCKS 360 TTGKVQDPES GDAAPDLSHS ADKDCGATVD QNRTGDKPGI ADPVGLKQKL AEADSDPQAA 420 ADDGVSTSRE KRRKLQDS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 8e-30 | 229 | 288 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025794590.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Refseq | XP_025794591.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Swissprot | B8ANX9 | 1e-165 | PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1 | ||||
TrEMBL | A0A2S3IR13 | 0.0 | A0A2S3IR13_9POAL; Uncharacterized protein | ||||
STRING | Si035682m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1971 | 37 | 89 |