PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00321.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | C2H2 | ||||||||
Protein Properties | Length: 166aa MW: 17952.5 Da PI: 10.2278 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6.2e-05 | 74 | 96 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp Cg++F++ + L H+ +H Zmw_sc00321.1.g00120.1.am.mk 74 HKCPVCGEVFPSGMALGGHMGKH 96 79**************9999888 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 0.052 | 44 | 61 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.9E-9 | 74 | 98 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 76 | 96 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MKWIWMRHPS GSTSSWLRRL NCQACHEDSP SKNGAEGTRD GSNICGRSSP TPQALGGHNY 60 RQWKAAEPAD RREHKCPVCG EVFPSGMALG GHMGKHRERL QTAGKRSKKQ RAEPPAAPVA 120 PPAPLASPAA GTMADEGIQT VLLPEVKGIR LFGVYMIPHV PSHPPP |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP69840 | 2 | 2 |