PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00309.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 345aa MW: 38307.6 Da PI: 7.128 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.3 | 1.8e-50 | 10 | 154 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................kvka.eekewyfFskr 64 +ppGfrFhPtdeel+ +yL+kkv+ ++++l +vi+e+d++k+ePwdL+ ++ + ++ewyfFs++ Zmw_sc00309.1.g00050.1.am.mk 10 VPPGFRFHPTDEELLYYYLRKKVSFEPIDL-DVIREIDLNKLEPWDLKGagansqdlfmahadrcRIGTgPQEEWYFFSHK 89 69****************************.9***************94588999999888887644443556******** PP NAM 65 dkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dkky+tg+r+nrat++g+Wkatg+dk+++ g+ +gl+ktLvfy+grap+g+kt+W+mheyrl Zmw_sc00309.1.g00050.1.am.mk 90 DKKYPTGTRTNRATAAGFWKATGRDKAIFLGnAGRRIGLRKTLVFYTGRAPHGKKTEWIMHEYRL 154 *****************************9767888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.18E-54 | 7 | 174 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.686 | 10 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-27 | 11 | 154 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence Send to blast |
MQPSSSPLSV PPGFRFHPTD EELLYYYLRK KVSFEPIDLD VIREIDLNKL EPWDLKGAGA 60 NSQDLFMAHA DRCRIGTGPQ EEWYFFSHKD KKYPTGTRTN RATAAGFWKA TGRDKAIFLG 120 NAGRRIGLRK TLVFYTGRAP HGKKTEWIMH EYRLDEDNVE VPEDGWVVCR VFKKKSIQRS 180 FEQPGMAPGD EEELQTLTPV DQKQGRLRNQ LMHGGFPAFD PFMHLPPLAS PDATPGSSTS 240 AFMSGTLALA MNPLEMGSSS QYMAKLTTVL AGANAGEVLL SGGDRIGAVA DWSILDNLLA 300 SRQNLDQLFH GKLGGAAVEA PHHYQQQLPL LMETGASSLP RLPLH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-48 | 8 | 176 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 8 | 176 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 8 | 176 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 8 | 176 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swm_B | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swm_C | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swm_D | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swp_A | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swp_B | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swp_C | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
3swp_D | 6e-48 | 8 | 176 | 18 | 170 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 8 | 176 | 15 | 167 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 8 | 176 | 15 | 167 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025827212.1 | 1e-167 | NAC domain-containing protein 76-like | ||||
Swissprot | Q5Z6B6 | 1e-103 | NAC76_ORYSJ; NAC domain-containing protein 76 | ||||
TrEMBL | A0A1E5VY61 | 1e-167 | A0A1E5VY61_9POAL; NAC domain-containing protein 76 (Fragment) | ||||
STRING | Pavir.Ab01037.1.p | 1e-162 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3461 | 37 | 81 |
Publications ? help Back to Top | |||
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