PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00308.1.g00340.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 299aa    MW: 32576.3 Da    PI: 5.2578
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00308.1.g00340.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.53.8e-15105160459
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                      k+ rr+ +NRe+ArrsR+RK+  +  Le  v  L+ eN++L k+l  ++++++  
  Zmw_sc00308.1.g00340.1.sm.mkhc 105 AKKMRRMLSNRESARRSRKRKQTHLNDLESQVSRLTDENTSLLKRLADITQKYKDA 160
                                     799****************************************9999999988755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-16102166IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.404104156IPR004827Basic-leucine zipper domain
PfamPF001703.0E-13104158IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-13106158No hitNo description
SuperFamilySSF579592.67E-12106157No hitNo description
CDDcd147027.74E-18107157No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
PfamPF124981.6E-22174279IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MAGDSGDDVV EVRCGGGGDP GAYAAVLKRK LDLYCAAVAK SMEAKSEESS LMYPNSQASD  60
TSQLISQASF DGNADSQCKL ANSGTSKEQS DDDGDFEETT NPANAKKMRR MLSNRESARR  120
SRKRKQTHLN DLESQVSRLT DENTSLLKRL ADITQKYKDA TLDNQNLIVD VDMMRRKVHI  180
AEEAVRRVTG ASMLLLPTTS DMPGSSMPLS SCAYDTASSV VPVQGSMRYF LQASLQDDQT  240
ELDLPNAITP LKNGETHTMA ASLRRVASLE NLQKRIHRDS TNSETALPFS DPEALATGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124RRSRKRK
2118125RRSRKRKQ
3120125SRKRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805357.11e-134light-inducible protein CPRF2-like
TrEMBLA0A2S3HFB11e-133A0A2S3HFB1_9POAL; Uncharacterized protein
TrEMBLA0A2T7EIZ51e-133A0A2T7EIZ5_9POAL; Uncharacterized protein
STRINGSi022331m1e-128(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943