PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00290.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 425aa MW: 46255.8 Da PI: 11.0076

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00290.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.8	5.7e-16	54	113	74	128
NAM 74 knratksgyWkatgkdkevlsk....kgel...vglkktLvfykgrapkgektdWvmheyrl 128 ++ra+k+gyW+ +gk+ +++++ + + vg+kktLvfy g+ p+g++tdWvm+ey+l Zmw_sc00290.1.g00050.1.am.mk 54 HQRAAKDGYWRLSGKEVPIFCTwvmsR--VplmVGIKKTLVFYLGKPPTGKRTDWVMQEYHL 113 68999*************9876531..2566**************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	16.662	1	135	IPR003441	NAC domain
SuperFamily	SSF101941	3.14E-25	13	118	IPR003441	NAC domain
Pfam	PF02365	3.2E-14	16	113	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence Send to blast
MAASVPLATE ASRPLPQGYK FNPTDHDIVV RYLRCCAMNQ PLPSGIIADK DILHQRAAKD 60 GYWRLSGKEV PIFCTWVMSR VPLMVGIKKT LVFYLGKPPT GKRTDWVMQE YHLAGGGLIP 120 YRVDVKTAGV KLELKAMTKR KSTSRWAHTV PHITLLHQRS SPHAPTTSLP PAPPFPSLSP 180 RSRQRSCSAP SPVPSCPTAP SCSLVRSAAP MPHCLSTEAT SGLATGSGMA IHTRGGGGGC 240 PFPTAVAVLK KVSAHWAVFP RHSSCRRRLC STSKRAYSRC LPCLRQRWRR AHLPMPQAPA 300 RWRRGCYLLR LLPRVLLVAS VGAAALTLLL HHRHGPKPPE PYSSTSRARP AFSDELFADS 360 PPGKRDPLQE DAAAVGGAGG KGSCATVERM GEEAVGRGST ELASLRVREL IRRHFELHGA 420 FRSVG

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence Send to blast

MAASVPLATE ASRPLPQGYK FNPTDHDIVV RYLRCCAMNQ PLPSGIIADK DILHQRAAKD  60
GYWRLSGKEV PIFCTWVMSR VPLMVGIKKT LVFYLGKPPT GKRTDWVMQE YHLAGGGLIP  120
YRVDVKTAGV KLELKAMTKR KSTSRWAHTV PHITLLHQRS SPHAPTTSLP PAPPFPSLSP  180
RSRQRSCSAP SPVPSCPTAP SCSLVRSAAP MPHCLSTEAT SGLATGSGMA IHTRGGGGGC  240
PFPTAVAVLK KVSAHWAVFP RHSSCRRRLC STSKRAYSRC LPCLRQRWRR AHLPMPQAPA  300
RWRRGCYLLR LLPRVLLVAS VGAAALTLLL HHRHGPKPPE PYSSTSRARP AFSDELFADS  360
PPGKRDPLQE DAAAVGGAGG KGSCATVERM GEEAVGRGST ELASLRVREL IRRHFELHGA  420
FRSVG